SMTL ID : 2ivo.1 (2 other biounits)

STRUCTURE OF UP1 PROTEIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-tetramer

Ligands

12 x WO4: TUNGSTATE(VI)ION(Non-covalent)

WO4.1: 4 residues within 4Å: Chain A: G.81, P.82, R.85, Q.313 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.85, A:R.85, A:Q.313 WO4.2: 1 residues within 4Å: Chain A: R.208 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.208, A:Y.215 WO4.3: 5 residues within 4Å: Chain A: R.85, R.92, T.309, I.310, V.311 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.85, A:R.92, A:R.92, A:T.309, A:V.311 WO4.4: 1 residues within 4Å: Chain A: R.305 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.305 WO4.5: 4 residues within 4Å: Chain B: G.81, P.82, R.85, Q.313 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.81, B:R.85, B:R.85, B:Q.313 WO4.6: 1 residues within 4Å: Chain B: R.305 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.305 WO4.7: 4 residues within 4Å: Chain C: G.81, P.82, R.85, Q.313 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:R.85, C:R.85, C:Q.313 WO4.8: 1 residues within 4Å: Chain C: R.208 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:R.208, C:Y.215 WO4.9: 5 residues within 4Å: Chain C: R.85, R.92, T.309, I.310, V.311 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:R.85, C:R.92, C:R.92, C:T.309, C:V.311 WO4.10: 1 residues within 4Å: Chain C: R.305 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:R.305 WO4.11: 4 residues within 4Å: Chain D: G.81, P.82, R.85, Q.313 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:G.81, D:R.85, D:R.85, D:Q.313 WO4.12: 1 residues within 4Å: Chain D: R.305 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:R.305

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hecker, A. et al., An Archaeal Orthologue of the Universal Protein Kae1 is an Iron Metalloprotein which Exhibits Atypical DNA-Binding Properties and Apurinic-Endonuclease Activity in Vitro. Nucleic Acids Res. (2007)

Release Date

2007-07-31

Peptides

UP1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

UP1

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