SMTL ID : 2jew.1

Crystal structure of ((2S)-5-amino-2-((1-n-propyl-1H-imidazol-4-yl) methyl)pentanoic acid) UK396,082 a TAFIa inhibitor, Bound to Activated Porcine Pancreatic carboxypeptidaseB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: R.81, E.82, E.289 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.82, A:E.289, A:E.289, H2O.12 ZN.2: 4 residues within 4Å: Chain A: H.66, E.69, H.194 Ligands: 720.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.66, A:E.69, A:E.69, A:H.194

1 x 720: (2S)-5-AMINO-2-[(1-PROPYL-1H-IMIDAZOL-4-YL)METHYL]PENTANOIC ACID(Non-covalent)

720.3: 14 residues within 4Å: Chain A: H.66, E.69, R.124, N.141, R.142, H.194, S.195, Y.196, S.205, I.245, D.253, T.266, E.268 Ligands: ZN.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.196, A:I.245, A:T.266 Hydrogen bonds: A:N.141, A:H.194, A:S.195, A:D.253 Water bridges: A:R.124, A:R.124 Salt bridges: A:H.66, A:R.124, A:R.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bunnage, M.E. et al., Discovery of potent & selective inhibitors of activated thrombin-activatable fibrinolysis inhibitor for the treatment of thrombosis. J. Med. Chem. (2007)

Release Date

2007-11-20

Peptides

CARBOXYPEPTIDASE B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CARBOXYPEPTIDASE B

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