SMTL ID : 2nnj.1

CYP2C8dH complexed with felodipine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: G.314, R.315, H.316 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.315, A:H.316 Salt bridges: A:H.316 SO4.2: 2 residues within 4Å: Chain A: R.114, N.115 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.115 Water bridges: A:F.116 Salt bridges: A:R.114 SO4.3: 3 residues within 4Å: Chain A: V.312, I.313, R.317 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.317 Salt bridges: A:R.317

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.4: 28 residues within 4Å: Chain A: R.79, I.94, I.95, W.102, R.106, L.113, I.160, L.276, A.279, G.280, T.283, T.284, T.287, Q.338, L.343, V.348, H.350, L.373, P.409, F.410, S.411, R.415, C.417, A.418, G.419, A.423, E.426 Ligands: 225.5 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:I.94, A:I.95, A:L.113, A:I.160, A:L.276, A:L.343, A:V.348, A:L.373, A:F.410, A:F.410, A:A.418, A:A.423 Hydrogen bonds: A:S.411 Salt bridges: A:R.79, A:R.79, A:R.106, A:H.350, A:R.415 Metal complexes: A:C.417

1 x 225: FELODIPINE(Non-covalent)

225.5: 13 residues within 4Å: Chain A: I.95, F.187, L.190, V.278, A.279, T.283, V.344, G.347, V.348, P.349, I.458, V.459 Ligands: HEM.4 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.95, A:F.187, A:V.278, A:A.279, A:T.283

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.6: 9 residues within 4Å: Chain A: I.84, R.87, I.88, S.192, W.194, F.208, T.211, H.212, L.216 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.84, A:I.84, A:R.87, A:R.87, A:I.88, A:W.194, A:F.208, A:F.208, A:T.211, A:L.216

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schoch, G.A. et al., Determinants of cytochrome P450 2C8 substrate binding: structures of complexes with montelukast, troglitazone, felodipine, and 9-cis-retinoic acid. J.Biol.Chem. (2008)

Release Date

2007-10-23

Peptides

Cytochrome P450 2C8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 2C8

Related Entries With Identical Sequence