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SMTL ID : 2nzx.2
(1 other biounit)
Crystal Structure of alpha1,3-Fucosyltransferase with GDP
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.90 Å
Oligo State
homo-dimer
Ligands
2 x
SO4
:
SULFATE ION
(Non-functional Binders)
SO4.1:
4 residues within 4Å:
Chain A:
H.300
,
K.301
,
N.302
,
A.303
6
PLIP interactions
:
6 interactions with chain A
Hydrogen bonds:
A:H.300
,
A:N.302
,
A:N.302
,
A:A.303
Water bridges:
A:H.300
Salt bridges:
A:H.300
SO4.3:
4 residues within 4Å:
Chain B:
H.300
,
K.301
,
N.302
,
A.303
6
PLIP interactions
:
6 interactions with chain B
Hydrogen bonds:
B:H.300
,
B:N.302
,
B:N.302
,
B:A.303
Water bridges:
B:H.300
Salt bridges:
B:H.300
2 x
GDP
:
GUANOSINE-5'-DIPHOSPHATE
(Non-covalent)
GDP.2:
15 residues within 4Å:
Chain A:
V.186
,
A.187
,
S.188
,
N.189
,
R.195
,
G.211
,
G.212
,
N.221
,
V.222
,
K.223
,
K.225
,
N.240
,
E.249
,
K.250
,
D.253
18
PLIP interactions
:
18 interactions with chain A
Hydrogen bonds:
A:S.188
,
A:S.188
,
A:N.189
,
A:N.189
,
A:R.195
,
A:V.222
,
A:V.222
,
A:K.225
,
A:N.240
,
A:E.249
Water bridges:
A:V.186
,
A:K.225
,
A:N.240
,
A:N.240
,
A:T.248
Salt bridges:
A:R.195
,
A:K.250
,
A:K.250
GDP.4:
15 residues within 4Å:
Chain B:
V.186
,
A.187
,
S.188
,
N.189
,
R.195
,
G.211
,
G.212
,
N.221
,
V.222
,
K.223
,
K.225
,
N.240
,
E.249
,
K.250
,
D.253
18
PLIP interactions
:
18 interactions with chain B
Hydrogen bonds:
B:S.188
,
B:S.188
,
B:N.189
,
B:N.189
,
B:R.195
,
B:V.222
,
B:V.222
,
B:K.225
,
B:N.240
,
B:E.249
Water bridges:
B:V.186
,
B:K.225
,
B:N.240
,
B:N.240
,
B:T.248
Salt bridges:
B:R.195
,
B:K.250
,
B:K.250
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Sun, H.Y. et al., Structure and mechanism of Helicobacter pylori fucosyltransferase. A basis for lipopolysaccharide variation and inhibitor design. J. Biol. Chem. (2007)
Release Date
2007-01-23
Peptides
Alpha1,3-fucosyltransferase:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
C
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Alpha1,3-fucosyltransferase
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Related Entries With Identical Sequence
2nzw.1
|
2nzw.2
|
2nzx.1
|
2nzy.1
|
2nzy.2
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