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SMTL ID : 2o2z.2
(1 other biounit)
Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.60 Å
Oligo State
homo-dimer
Ligands
4 x
SO4
:
SULFATE ION
(Non-functional Binders)
SO4.1:
8 residues within 4Å:
Chain A:
G.40
,
G.41
,
S.42
,
S.43
,
G.56
,
R.59
,
R.79
,
N.93
7
PLIP interactions
:
7 interactions with chain A
Hydrogen bonds:
A:G.40
,
A:S.42
,
A:S.43
,
A:N.93
Water bridges:
A:S.43
Salt bridges:
A:R.59
,
A:R.79
SO4.2:
8 residues within 4Å:
Chain A:
G.12
,
G.13
,
T.14
,
G.15
,
G.187
,
S.188
,
S.192
Ligands:
NAD.3
9
PLIP interactions
:
9 interactions with chain A
Hydrogen bonds:
A:G.12
,
A:G.13
,
A:T.14
,
A:G.15
,
A:S.188
,
A:S.188
,
A:S.192
Water bridges:
A:L.16
,
A:T.191
SO4.4:
7 residues within 4Å:
Chain B:
G.40
,
S.42
,
S.43
,
G.56
,
R.59
,
R.79
,
N.93
8
PLIP interactions
:
8 interactions with chain B
Hydrogen bonds:
B:S.42
,
B:S.43
,
B:N.93
Water bridges:
B:S.43
,
B:R.79
,
B:R.79
Salt bridges:
B:R.59
,
B:R.79
SO4.5:
8 residues within 4Å:
Chain B:
G.12
,
G.13
,
T.14
,
G.15
,
G.187
,
S.188
,
S.192
Ligands:
NAD.6
7
PLIP interactions
:
7 interactions with chain B
Hydrogen bonds:
B:G.12
,
B:G.13
,
B:T.14
,
B:G.15
,
B:S.188
,
B:S.192
Water bridges:
B:L.16
2 x
NAD
:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
(Non-covalent)
NAD.3:
16 residues within 4Å:
Chain A:
T.14
,
G.15
,
V.18
,
G.187
,
S.188
,
N.218
,
V.219
,
M.220
,
Q.222
,
K.264
,
Y.265
,
E.268
,
V.299
,
R.301
,
H.302
Ligands:
SO4.2
17
PLIP interactions
:
17 interactions with chain A
Hydrophobic interactions:
A:V.219
Hydrogen bonds:
A:T.14
,
A:T.14
,
A:N.218
,
A:V.219
,
A:Q.222
,
A:K.264
,
A:Y.265
,
A:E.268
,
A:R.301
,
A:R.301
,
A:H.302
Water bridges:
A:S.188
,
A:Q.222
,
A:R.301
Salt bridges:
A:R.301
,
A:R.301
NAD.6:
17 residues within 4Å:
Chain B:
T.14
,
G.15
,
G.187
,
S.188
,
N.218
,
V.219
,
M.220
,
Q.222
,
K.264
,
Y.265
,
E.268
,
D.298
,
V.299
,
L.300
,
R.301
,
H.302
Ligands:
SO4.5
15
PLIP interactions
:
15 interactions with chain B
Hydrophobic interactions:
B:V.219
Hydrogen bonds:
B:T.14
,
B:V.219
,
B:Q.222
,
B:K.264
,
B:K.264
,
B:Y.265
,
B:R.301
,
B:R.301
,
B:H.302
Water bridges:
B:N.218
,
B:Q.222
,
B:T.226
Salt bridges:
B:R.301
,
B:R.301
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein (NP_244435.1) from Bacillus halodurans at 2.60 A resolution. To be published
Release Date
2006-12-19
Peptides
hypothetical protein:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
D
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Secondary Structure
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Chain
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Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
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hypothetical protein
Related Entries With Identical Sequence
2o2z.1
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
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