SMTL ID : 2o4k.1

Crystal Structure of HIV-1 Protease (Q7K) in Complex with Atazanavir

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: G.73, T.74, N.88 Ligand excluded by PLIP

1 x DR7: (3S,8S,9S,12S)-3,12-BIS(1,1-DIMETHYLETHYL)-8-HYDROXY-4,11-DIOXO-9-(PHENYLMETHYL)-6-[[4-(2-PYRIDINYL)PHENYL]METHYL]-2,5, 6,10,13-PENTAAZATETRADECANEDIOIC ACID DIMETHYL ESTER(Non-covalent)

DR7.2: 25 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, D.29, I.47, G.48, G.49, I.50, F.53, P.81, V.82, I.84 Chain B: R.8, D.25, G.27, A.28, D.29, I.47, G.48, G.49, I.50, P.81, V.82, I.84 21 PLIP interactions: 11 interactions with chain B, 10 interactions with chain A Hydrophobic interactions: B:A.28, B:I.47, B:I.50, B:V.82, B:I.84, A:A.28, A:I.47, A:F.53, A:P.81, A:V.82 Hydrogen bonds: B:G.27, B:D.29, B:G.48, A:D.25, A:G.27, A:D.29, A:G.48 Water bridges: B:I.50, B:I.50 Salt bridges: B:D.25, A:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muzammil, S. et al., Unique thermodynamic response of tipranavir to human immunodeficiency virus type 1 protease drug resistance mutations. J.Virol. (2007)

Release Date

2006-12-12

Peptides

protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

protease

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