SMTL ID : 2o8x.3 (2 other biounits)

Crystal structure of the "-35 element" promoter recognition domain of Mycobacterium tuberculosis SigC

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-hexamer

Ligands

18 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: T.17, T.18 Ligand excluded by PLIP SO4.2: 2 residues within 4Å: Chain A: Y.34, R.56 Ligand excluded by PLIP SO4.3: 3 residues within 4Å: Chain A: T.47, S.50, R.51 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: L.25, L.26, L.30 Chain B: V.9, L.59 Ligand excluded by PLIP SO4.5: 5 residues within 4Å: Chain B: L.25, L.26, L.29, L.30 Chain C: V.9 Ligand excluded by PLIP SO4.6: 4 residues within 4Å: Chain B: T.17, D.19, Q.20, R.54 Ligand excluded by PLIP SO4.7: 2 residues within 4Å: Chain B: T.17, T.18 Ligand excluded by PLIP SO4.8: 7 residues within 4Å: Chain A: V.9, L.59, L.60 Chain C: L.25, L.26, L.29, L.30 Ligand excluded by PLIP SO4.9: 5 residues within 4Å: Chain C: T.17, D.19, Q.20, R.51, R.54 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain D: T.17, T.18 Ligand excluded by PLIP SO4.11: 2 residues within 4Å: Chain D: Y.34, R.56 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain D: T.47, S.50, R.51 Ligand excluded by PLIP SO4.13: 5 residues within 4Å: Chain D: L.25, L.26, L.30 Chain E: V.9, L.59 Ligand excluded by PLIP SO4.14: 5 residues within 4Å: Chain E: L.25, L.26, L.29, L.30 Chain F: V.9 Ligand excluded by PLIP SO4.15: 4 residues within 4Å: Chain E: T.17, D.19, Q.20, R.54 Ligand excluded by PLIP SO4.16: 2 residues within 4Å: Chain E: T.17, T.18 Ligand excluded by PLIP SO4.17: 7 residues within 4Å: Chain D: V.9, L.59, L.60 Chain F: L.25, L.26, L.29, L.30 Ligand excluded by PLIP SO4.18: 5 residues within 4Å: Chain F: T.17, D.19, Q.20, R.51, R.54 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thakur, K.G. et al., Structural and biophysical studies on two promoter recognition domains of the extra-cytoplasmic function sigma factor sigma(C) from Mycobacterium tuberculosis. J.Biol.Chem. (2007)

Release Date

2006-12-26

Peptides

Probable RNA polymerase sigma-C factor: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Probable RNA polymerase sigma-C factor

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