- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.11 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ACT: ACETATE ION(Non-functional Binders)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.3: 5 residues within 4Å:- Chain A: A.29, N.30, G.46, G.47
- Ligands: MPD.4
1 PLIP interactions:1 interactions with chain A- Water bridges: A:A.29
MPD.4: 6 residues within 4Å:- Chain A: Y.28, A.29, S.48
- Chain C: N.112, E.124
- Ligands: MPD.3
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain C- Hydrophobic interactions: A:Y.28, A:A.29, C:N.112
- Hydrogen bonds: A:A.29
MPD.7: 5 residues within 4Å:- Chain B: A.29, N.30, G.46, G.47
- Ligands: MPD.8
1 PLIP interactions:1 interactions with chain B- Water bridges: B:A.29
MPD.8: 6 residues within 4Å:- Chain B: Y.28, A.29, S.48
- Chain D: N.112, E.124
- Ligands: MPD.7
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain D- Hydrophobic interactions: B:Y.28, B:A.29, D:N.112
- Hydrogen bonds: B:A.29
MPD.10: 11 residues within 4Å:- Chain A: S.48, G.49, H.71, N.72, Y.73
- Chain C: S.111, N.112, V.126, Y.127, T.128, A.130
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain C- Hydrophobic interactions: A:Y.73, C:V.126, C:A.130
- Hydrogen bonds: A:N.72
- Water bridges: A:G.49, A:G.49, A:V.70
MPD.12: 11 residues within 4Å:- Chain B: S.48, G.49, H.71, N.72, Y.73
- Chain D: S.111, N.112, V.126, Y.127, T.128, A.130
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain D- Hydrophobic interactions: B:Y.73, D:V.126, D:A.130
- Hydrogen bonds: B:N.72
- Water bridges: B:G.49, B:G.49, B:V.70
- 2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.9: 6 residues within 4Å:- Chain C: D.78, I.79, V.80, R.102, R.108, Y.113
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:D.78, C:R.102, C:R.108, C:Y.113
- Water bridges: C:A.105, C:Y.113
TRS.11: 6 residues within 4Å:- Chain D: D.78, I.79, V.80, R.102, R.108, Y.113
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:D.78, D:R.102, D:R.108, D:Y.113
- Water bridges: D:A.105, D:Y.113
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Leonidas, D.D. et al., Structural Basis for the Carbohydrate Recognition of the Sclerotium rolfsii Lectin. J.Mol.Biol. (2007)
- Release Date
- 2007-05-01
- Peptides
- Sclerotium rolfsii lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.11 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ACT: ACETATE ION(Non-functional Binders)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Leonidas, D.D. et al., Structural Basis for the Carbohydrate Recognition of the Sclerotium rolfsii Lectin. J.Mol.Biol. (2007)
- Release Date
- 2007-05-01
- Peptides
- Sclerotium rolfsii lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
AD
A