- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 6 x ACT: ACETATE ION(Non-functional Binders)
ACT.2: 3 residues within 4Å:- Chain A: N.13, K.119, R.121
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:R.121
- Hydrogen bonds: A:K.119
- Water bridges: A:N.15
ACT.4: 2 residues within 4Å:- Chain B: R.75, A.130
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.75
- Water bridges: B:S.111, B:S.111
ACT.5: 3 residues within 4Å:- Chain B: N.13, N.15, K.119
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:N.13, B:N.15
- Salt bridges: B:R.121
ACT.10: 3 residues within 4Å:- Chain C: N.13, K.119, R.121
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:R.121
- Hydrogen bonds: C:K.119
- Water bridges: C:N.15
ACT.12: 2 residues within 4Å:- Chain D: R.75, A.130
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:R.75
- Water bridges: D:S.111, D:S.111
ACT.13: 3 residues within 4Å:- Chain D: N.13, N.15, K.119
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:N.13, D:N.15
- Salt bridges: D:R.121
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.6: 5 residues within 4Å:- Chain B: S.48, G.49, H.71, N.72, Y.73
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:Y.73
- Hydrogen bonds: B:N.72
- Water bridges: B:G.49, B:H.71
MPD.7: 5 residues within 4Å:- Chain B: A.29, N.30, G.46, G.47
- Ligands: MPD.8
No protein-ligand interaction detected (PLIP)MPD.8: 4 residues within 4Å:- Chain B: Y.28, A.29, S.48
- Ligands: MPD.7
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:Y.28, B:A.29
- Hydrogen bonds: B:A.29
MPD.14: 5 residues within 4Å:- Chain D: S.48, G.49, H.71, N.72, Y.73
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:Y.73
- Hydrogen bonds: D:N.72
- Water bridges: D:G.49, D:H.71
MPD.15: 5 residues within 4Å:- Chain D: A.29, N.30, G.46, G.47
- Ligands: MPD.16
No protein-ligand interaction detected (PLIP)MPD.16: 4 residues within 4Å:- Chain D: Y.28, A.29, S.48
- Ligands: MPD.15
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:Y.28, D:A.29
- Hydrogen bonds: D:A.29
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Leonidas, D.D. et al., Structural Basis for the Carbohydrate Recognition of the Sclerotium rolfsii Lectin. J.Mol.Biol. (2007)
- Release Date
- 2007-05-01
- Peptides
- Sclerotium rolfsii lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 6 x ACT: ACETATE ION(Non-functional Binders)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Leonidas, D.D. et al., Structural Basis for the Carbohydrate Recognition of the Sclerotium rolfsii Lectin. J.Mol.Biol. (2007)
- Release Date
- 2007-05-01
- Peptides
- Sclerotium rolfsii lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B