SMTL ID : 2ogn.1

The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-280080

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.56 Å

Oligo State

monomer

Ligands

1 x G80: (3AS,4R,5S,6S,8R,9R,9AR,10R)-5-HYDROXY-4,6,9,10-TETRAMETHYL-1-OXO-6-VINYLDECAHYDRO-3A,9-PROPANOCYCLOPENTA[8]ANNULEN-8-YL (PIPERIDIN-4-YLTHIO)ACETATE(Non-functional Binders)

G80.1: 8 residues within 4Å: Chain A: G.2044, C.2046, A.2430, C.2431, A.2482, U.2483, G.2484, U.2485 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davidovich, C. et al., Induced-fit tightens pleuromutilins binding to ribosomes and remote interactions enable their selectivity. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2007-05-01

Peptides

50S ribosomal protein L3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
B

50S ribosomal protein L3

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