SMTL ID : 2oh2.1 (1 other biounit)

Ternary Complex of Human DNA Polymerase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain C: D.89, M.90, D.180 Ligands: TTP.2 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:D.89, C:M.90, C:D.180

1 x TTP: THYMIDINE-5'-TRIPHOSPHATE(Non-covalent)

TTP.2: 17 residues within 4Å: Chain A: C.13 Chain B: A.5, G.6 Chain C: D.89, M.90, D.91, A.92, F.93, Y.94, S.119, T.120, Y.123, R.126, D.180, E.181, K.310 Ligands: MG.1 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:T.120 Hydrogen bonds: C:A.92, C:F.93, C:Y.94, C:Y.123, C:Y.123, C:E.181 Water bridges: C:D.89, C:E.181 Salt bridges: C:R.126, C:R.126, C:K.310, C:K.310

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lone, S. et al., Ternary complex of the catalytic core of human DNA polymerase Kappa with DNA and dTT. To be Published

Release Date

2007-02-27

Peptides

DNA polymerase kappa: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

DNA polymerase kappa

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