SMTL ID : 2olj.1

ABC Protein ArtP in complex with ADP/Mg2+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: S.64, D.184, E.185 Ligands: ADP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:S.64, H2O.7, H2O.8, H2O.8, H2O.8 MG.5: 3 residues within 4Å: Chain B: S.64, E.185 Ligands: ADP.6 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:S.64, H2O.13, H2O.13, H2O.13, H2O.13

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 13 residues within 4Å: Chain A: F.34, L.37, V.39, P.58, S.59, G.60, S.61, G.62, K.63, S.64, T.65 Chain B: H.154 Ligands: MG.1 15 PLIP interactions: 14 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:G.60, A:G.60, A:S.61, A:G.62, A:K.63, A:S.64, A:T.65, A:T.65, B:H.154 Water bridges: A:S.64, A:S.64, A:D.184, A:E.185 Salt bridges: A:K.63 pi-Stacking: A:F.34 ADP.6: 14 residues within 4Å: Chain A: H.154, Y.156 Chain B: F.34, L.37, V.39, P.58, S.59, G.60, S.61, G.62, K.63, S.64, T.65 Ligands: MG.5 17 PLIP interactions: 2 interactions with chain A, 15 interactions with chain B Hydrogen bonds: A:H.154, B:G.60, B:S.61, B:G.62, B:K.63, B:S.64, B:S.64, B:T.65 Water bridges: A:Y.156, B:S.59, B:K.63, B:S.64, B:S.64, B:E.185 Salt bridges: B:K.63 pi-Stacking: B:F.34, B:F.34

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 1 residues within 4Å: Ligands: GOL.4 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.177 GOL.4: 5 residues within 4Å: Chain A: K.146, L.174, L.205, E.208 Ligands: GOL.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.146 Water bridges: A:E.208, A:E.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thaben, P.F. et al., Crystal structures of the ATP-binding cassette (ABC) protein ArtP from Geobacillus stearothermophilus reveal a stable dimer in the post hydrolysis state and an asymmetry in the dimerization region. To be Published

Release Date

2008-01-15

Peptides

Amino acid ABC transporter: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Amino acid ABC transporter

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