SMTL ID : 2ort.1

Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 1-Benzo[1,3]dioxol-5-ylmethyl-3S-(4-imidazol-1-yl-phenoxy)-piperidine Complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

homo-dimer

Ligands

2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 18 residues within 4Å: Chain A: W.75, A.78, P.79, R.80, C.81, I.82, G.83, Q.86, L.90, S.123, F.250, N.251, G.252, W.253, M.255, Y.370, Y.372 Ligands: 342.2 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:W.75, A:W.75, A:A.78, A:R.80, A:I.82, A:L.90, A:L.90, A:F.250, A:F.250, A:F.250, A:W.253, A:W.253, A:Y.370, A:Y.370 Hydrogen bonds: A:R.80, A:R.80, A:Y.372 Water bridges: A:R.80 Salt bridges: A:R.80 pi-Stacking: A:W.75 Metal complexes: A:C.81 HEM.3: 18 residues within 4Å: Chain B: W.75, A.78, P.79, R.80, C.81, I.82, G.83, Q.86, L.90, S.123, F.250, N.251, G.252, W.253, M.255, Y.370, Y.372 Ligands: 342.4 22 PLIP interactions: 22 interactions with chain B, Hydrophobic interactions: B:W.75, B:W.75, B:A.78, B:R.80, B:I.82, B:L.90, B:L.90, B:F.250, B:F.250, B:F.250, B:W.253, B:W.253, B:Y.370, B:Y.370 Hydrogen bonds: B:R.80, B:R.80, B:Y.372, B:Y.372 Water bridges: B:R.80 Salt bridges: B:R.80 pi-Stacking: B:W.75 Metal complexes: B:C.81

2 x 342: (3S)-1-(1,3-BENZODIOXOL-5-YLMETHYL)-3-[4-(1H-IMIDAZOL-1-YL)PHENOXY]PIPERIDINE(Non-covalent)

342.2: 9 residues within 4Å: Chain A: Q.144, R.147, P.231, V.233, G.252, W.253, Y.254, M.255 Ligands: HEM.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:P.231, A:Y.254 Hydrogen bonds: A:M.255 Water bridges: A:Q.144, A:R.147 342.4: 9 residues within 4Å: Chain B: Q.144, R.147, P.231, V.233, G.252, W.253, Y.254, M.255 Ligands: HEM.3 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:P.231, B:Y.254 Hydrogen bonds: B:M.255 Water bridges: B:R.147, B:Y.228

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davey, D.D. et al., Design, Synthesis, and Activity of 2-Imidazol-1-ylpyrimidine Derived Inducible Nitric Oxide Synthase Dimerization Inhibitors. J.Med.Chem. (2007)

Release Date

2007-04-17

Peptides

Nitric oxide synthase, inducible: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Nitric oxide synthase, inducible

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