SMTL ID : 2ouh.1 (1 other biounit)

Crystal structure of the Thrombospondin-1 N-terminal domain in complex with fractionated Heparin DP10

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.33, V.35, R.46, R.81 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.33, A:R.46, A:R.81 SO4.2: 6 residues within 4Å: Chain A: R.46, R.81, Q.82, M.83, G.137, G.196 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.82 Salt bridges: A:R.46, A:R.81 SO4.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., Heparin-induced cis- and trans-Dimerization Modes of the Thrombospondin-1 N-terminal Domain. J.Biol.Chem. (2008)

Release Date

2008-01-08

Peptides

Thrombospondin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Thrombospondin-1

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