SMTL ID : 2ouh.2 (1 other biounit)

Crystal structure of the Thrombospondin-1 N-terminal domain in complex with fractionated Heparin DP10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: V.35, R.46, V.197 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.81 Salt bridges: A:R.46 SO4.2: 3 residues within 4Å: Chain A: R.46, I.47, E.48 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.46 SO4.3: 5 residues within 4Å: Chain A: R.46, Q.82, M.83, Q.195, G.196 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., Heparin-induced cis- and trans-Dimerization Modes of the Thrombospondin-1 N-terminal Domain. J.Biol.Chem. (2008)

Release Date

2008-01-08

Peptides

Thrombospondin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Thrombospondin-1

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