SMTL ID : 2p83.1 (2 other biounits)

Potent and selective isophthalamide S2 hydroxyethylamine inhibitor of BACE1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain A: R.370, V.372, K.384 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.370, A:K.384 PO4.2: 4 residues within 4Å: Chain A: R.298, S.388, Q.389 Ligands: MR0.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.388, A:Q.389 Salt bridges: A:R.298

1 x MR0: N~3~-{(1S,2R)-1-(3,5-DIFLUOROBENZYL)-2-HYDROXY-3-[(3-METHOXYBENZYL)AMINO]PROPYL}-N~1~,N~1~-DIPROPYLBENZENE-1,3,5-TRICARBOXAMIDE(Non-covalent)

MR0.3: 25 residues within 4Å: Chain A: G.74, Q.75, G.76, L.93, D.95, G.97, S.98, P.133, Y.134, T.135, Q.136, G.137, K.170, F.171, I.173, W.178, I.181, Y.261, I.289, D.291, G.293, T.294, T.295, R.298 Ligands: PO4.2 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.93, A:Y.134, A:Q.136, A:F.171, A:I.181, A:Y.261 Hydrogen bonds: A:D.95, A:T.135, A:T.135, A:Q.136, A:D.291, A:G.293, A:T.295, A:T.295 Water bridges: A:N.296 pi-Stacking: A:Y.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kortum, S.W. et al., Potent and selective isophthalamide S(2) hydroxyethylamine inhibitors of BACE1. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-06-19

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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