SMTL ID : 2pgt.1

CRYSTAL STRUCTURE OF HUMAN GLUTATHIONE S-TRANSFERASE P1-1[V104] COMPLEXED WITH (9R,10R)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: F.143, R.187 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.187, A:R.187, A:R.187 Salt bridges: A:R.187

2 x GPR: (9R,10R)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE(Non-covalent)

GPR.2: 15 residues within 4Å: Chain A: Y.8, F.9, V.11, R.14, W.39, K.45, G.51, Q.52, L.53, P.54, Q.65, S.66, Y.109, G.206 Chain B: D.99 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:F.9, A:V.11 Hydrogen bonds: A:Q.52, A:L.53, A:L.53, A:Q.65, A:Q.65, A:S.66, A:G.206 Water bridges: A:K.45, A:K.45, A:Q.65, A:N.67, A:E.98 Salt bridges: A:R.14, A:K.45 pi-Stacking: A:F.9, A:Y.109 GPR.4: 15 residues within 4Å: Chain A: D.99 Chain B: Y.8, F.9, V.11, R.14, W.39, K.45, G.51, Q.52, L.53, P.54, Q.65, S.66, Y.109, G.206 20 PLIP interactions: 19 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:F.9, B:F.9, B:V.11 Hydrogen bonds: B:Q.52, B:L.53, B:L.53, B:Q.65, B:Q.65, B:Q.65, B:S.66, B:Y.109, B:G.206 Water bridges: B:R.14, B:N.67, B:N.67, B:I.204, A:D.99 Salt bridges: B:R.14, B:K.45 pi-Stacking: B:Y.109

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.3: 6 residues within 4Å: Chain A: A.23, W.29, K.30, E.31, F.193, E.198 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.30, A:E.31 Water bridges: A:F.193, A:E.198 Salt bridges: A:E.198, A:E.198 EPE.5: 6 residues within 4Å: Chain B: A.23, W.29, K.30, E.31, F.193, E.198 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.30, B:E.31 Water bridges: B:F.193 Salt bridges: B:E.198, B:E.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ji, X. et al., Structure and function of the xenobiotic substrate-binding site and location of a potential non-substrate-binding site in a class pi glutathione S-transferase. Biochemistry (1997)

Release Date

1997-09-04

Peptides

GLUTATHIONE S-TRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

GLUTATHIONE S-TRANSFERASE

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