SMTL ID : 2pvy.1

Crystal Structure of FGF Receptor 2 (FGFR2) Kinase Domain Harboring the Pathogenic K659N Mutation Responsible for an Unclassified Craniosynostosis Syndrome.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.181, R.205, Y.213, N.215, T.216 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.213, A:Y.213, A:T.216, A:T.216, A:T.216 Salt bridges: A:R.181, A:R.205 SO4.3: 4 residues within 4Å: Chain B: R.181, R.205, Y.213, R.220 3 PLIP interactions: 3 interactions with chain B Salt bridges: B:R.181, B:R.205, B:R.220 SO4.5: 5 residues within 4Å: Chain C: R.181, L.203, R.205, Y.213, R.220 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:Y.213 Water bridges: C:R.181, C:R.220 Salt bridges: C:R.181, C:R.205, C:R.220 SO4.7: 5 residues within 4Å: Chain D: R.181, R.205, Y.213, T.216, R.220 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:Y.213, D:T.216, D:R.220, D:R.220 Water bridges: D:R.181, D:R.181 Salt bridges: D:R.181, D:R.205

4 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)

ACP.2: 9 residues within 4Å: Chain A: L.43, V.51, A.71, V.120, E.121, Y.122, A.123, N.127, L.189 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.121, A:A.123, A:N.127 Water bridges: A:N.127 ACP.4: 11 residues within 4Å: Chain B: L.43, V.51, A.71, V.120, E.121, Y.122, A.123, N.127, R.186, L.189, D.200 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:E.121, B:A.123, B:N.127, B:N.127, B:R.186, B:N.187, B:D.200, B:D.200 ACP.6: 9 residues within 4Å: Chain C: L.43, V.51, A.71, V.120, E.121, Y.122, A.123, N.127, L.189 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:E.121, C:A.123, C:N.127, C:N.127 ACP.8: 8 residues within 4Å: Chain D: L.43, A.71, V.120, E.121, Y.122, A.123, N.127, L.189 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:E.121, D:A.123, D:N.127, D:N.127 Water bridges: D:G.126, D:R.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, H. et al., A molecular brake in the kinase hinge region regulates the activity of receptor tyrosine kinases. Mol.Cell (2007)

Release Date

2007-09-25

Peptides

Fibroblast growth factor receptor 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Fibroblast growth factor receptor 2

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