SMTL ID : 2q5g.2 (2 other biounits)

Ligand binding domain of PPAR delta receptor in complex with a partial agonist

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x 1FA: [(7-{[2-(3-MORPHOLIN-4-YLPROP-1-YN-1-YL)-6-{[4-(TRIFLUOROMETHYL)PHENYL]ETHYNYL}PYRIDIN-4-YL]THIO}-2,3-DIHYDRO-1H-INDEN- 4-YL)OXY]ACETIC ACID(Non-covalent)

1FA.1: 20 residues within 4Å: Chain A: M.34, L.61, E.65, V.87, F.88, R.90, C.91, Q.92, T.94, T.98, M.135, L.136, I.139, L.145, V.147, V.154, I.169, I.170, K.173, H.255 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:T.94, A:I.139, A:L.145, A:V.147, A:V.154 Hydrogen bonds: A:Q.92 Salt bridges: A:K.173, A:H.255

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pettersson, I. et al., Design of a partial PPARdelta agonist. Bioorg.Med.Chem.Lett. (2007)

Release Date

2008-06-03

Peptides

Peroxisome proliferator-activated receptor delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Peroxisome proliferator-activated receptor delta

Related Entries With Identical Sequence