SMTL ID : 2q6c.1

Design and synthesis of novel, conformationally restricted HMG-COA reductase inhibitors

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: A.220, M.221, G.222, M.223, N.224, G.373 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:M.221, A:G.222, A:M.223, A:N.224, A:N.224 Water bridges: A:M.225, A:M.225 SO4.3: 6 residues within 4Å: Chain B: A.220, M.221, G.222, M.223, N.224, G.373 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:M.221, B:G.222, B:M.223, B:N.224 Water bridges: B:G.222, B:M.225, B:G.373 SO4.5: 6 residues within 4Å: Chain C: A.220, M.221, G.222, M.223, N.224, G.373 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:G.222, C:M.223, C:N.224 Water bridges: C:M.221, C:M.221, C:M.225 SO4.7: 5 residues within 4Å: Chain D: A.220, M.221, G.222, M.223, N.224 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:M.221, D:G.222, D:M.223, D:N.224, D:N.224 Water bridges: D:M.225

4 x HR1: (3R,5R)-7-[1-(4-FLUOROPHENYL)-3-ISOPROPYL-4-OXO-5-PHENYL-4,5-DIHYDRO-3H-PYRROLO[2,3-C]QUINOLIN-2-YL]-3,5-DIHYDROXYHEPTANOIC ACID(Non-covalent)

HR1.2: 22 residues within 4Å: Chain A: R.156, M.223, S.227, V.249, S.250, N.252, D.256, K.257, K.258 Chain B: E.125, G.126, C.127, L.128, S.131, R.134, K.301, A.317, H.318, N.321, L.419, A.422, L.423 16 PLIP interactions: 9 interactions with chain A, 7 interactions with chain B Hydrophobic interactions: A:V.249, B:E.125, B:L.419, B:L.423 Hydrogen bonds: A:R.156, A:R.156, A:S.250, B:E.125, B:S.131, B:N.321 Water bridges: A:S.250, A:N.252, A:K.257 Salt bridges: A:R.156, A:K.258, B:K.301 HR1.4: 22 residues within 4Å: Chain A: E.125, G.126, C.127, L.128, S.131, R.134, K.301, A.317, H.318, N.321, L.419, A.422, H.427 Chain B: R.156, M.223, S.227, V.249, S.250, N.252, D.256, K.257, K.258 17 PLIP interactions: 9 interactions with chain A, 8 interactions with chain B Hydrophobic interactions: A:E.125, A:H.318, A:L.419, A:A.422, A:H.427 Hydrogen bonds: A:E.125, A:S.131, A:N.321, B:R.156, B:R.156, B:S.250 Salt bridges: A:K.301, B:R.156, B:K.258 Water bridges: B:S.250, B:N.252, B:K.257 HR1.6: 22 residues within 4Å: Chain C: R.156, M.223, S.227, V.249, S.250, N.252, D.256, K.257, K.258 Chain D: E.125, G.126, C.127, L.128, S.131, K.301, A.317, H.318, N.321, L.419, A.422, L.423, H.427 15 PLIP interactions: 7 interactions with chain D, 8 interactions with chain C Hydrophobic interactions: D:L.419, D:A.422, D:L.423, D:H.427 Hydrogen bonds: D:E.125, D:N.321, C:R.156, C:R.156, C:S.250 Salt bridges: D:K.301, C:R.156, C:K.258 Water bridges: C:S.250, C:N.252, C:K.257 HR1.8: 21 residues within 4Å: Chain C: E.125, G.126, C.127, L.128, S.131, K.301, A.317, H.318, N.321, L.419, A.422, L.423 Chain D: R.156, M.223, S.227, V.249, S.250, N.252, D.256, K.257, K.258 15 PLIP interactions: 9 interactions with chain D, 6 interactions with chain C Hydrogen bonds: D:R.156, D:R.156, D:S.250, D:D.256, C:E.125, C:N.321 Water bridges: D:S.250, D:N.252, D:K.257 Salt bridges: D:R.156, D:K.258, C:K.301 Hydrophobic interactions: C:L.419, C:A.422, C:L.423

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pfefferkorn, J.A. et al., Design and synthesis of novel, conformationally restricted HMG-CoA reductase inhibitors. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-07-17

Peptides

3-hydroxy-3-methylglutaryl-coenzyme A reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

3-hydroxy-3-methylglutaryl-coenzyme A reductase

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