SMTL ID : 2qu6.1 (1 other biounit)

Crystal structure of the VEGFR2 kinase domain in complex with a benzoxazole inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Q.305, R.308, H.309 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.305 Salt bridges: A:R.308, A:H.309

1 x 857: 4-({2-[(4-chloro-3-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}phenyl)amino]-1,3-benzoxazol-5-yl}oxy)-N-methylpyridine-2-carboxamide(Non-covalent)

857.2: 21 residues within 4Å: Chain A: L.26, V.34, A.52, K.54, E.71, I.74, L.75, V.85, T.102, E.103, F.104, C.105, G.108, L.155, I.161, H.162, L.171, I.180, C.181, D.182, F.183 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.34, A:K.54, A:I.74, A:L.75, A:V.85, A:T.102, A:L.171, A:D.182, A:F.183 Hydrogen bonds: A:E.71, A:C.105, A:C.105, A:D.182 Salt bridges: A:D.182 pi-Cation interactions: A:K.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Potashman, M.H. et al., Design, Synthesis, and Evaluation of Orally Active Benzimidazoles and Benzoxazoles as Vascular Endothelial Growth Factor-2 Receptor Tyrosine Kinase Inhibitors. J.Med.Chem. (2007)

Release Date

2007-09-25

Peptides

Vascular endothelial growth factor receptor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vascular endothelial growth factor receptor 2

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