SMTL ID : 2qz3.2 (1 other biounit)

Crystal structure of a glycoside hydrolase family 11 xylanase from Bacillus subtilis in complex with xylotetraose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x XYP- XYP- XYP: beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose

XYP-XYP-XYP.1: 20 residues within 4Å: Chain A: Q.7, W.9, N.35, V.37, Y.65, Y.69, W.71, E.78, Y.80, R.112, P.116, S.117, I.118, F.125, Q.127, W.129, Y.166, A.172, G.173, Y.174 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.7, A:Y.69, A:Y.166 XYP-XYP-XYP.2: 8 residues within 4Å: Chain A: N.54, G.56, V.57, N.141, N.181, V.182, T.183, W.185 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.54, A:N.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vandermarliere, E. et al., Crystallographic analysis shows substrate binding at the -3 to +1 active-site subsites and at the surface of glycoside hydrolase family 11 endo-1,4-beta-xylanases. Biochem.J. (2008)

Release Date

2007-12-11

Peptides

Endo-1,4-beta-xylanase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Endo-1,4-beta-xylanase A

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