SMTL ID : 2r59.1

Leukotriene A4 hydrolase complexed with inhibitor RB3041

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.301, H.305, E.324, Y.389 Ligands: PH0.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.301, A:H.305, A:E.324, A:E.324

1 x YB: YTTERBIUM (III) ION(Non-covalent)

YB.2: 1 residues within 4Å: Chain A: D.487 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.487, A:D.487, H2O.3, H2O.13

1 x PH0: N-{(2S)-3-[(R)-[(1R)-1-amino-2-phenylethyl](hydroxy)phosphoryl]-2-benzylpropanoyl}-L-phenylalanine(Non-covalent)

PH0.3: 22 residues within 4Å: Chain A: Q.140, Q.142, A.143, Y.273, G.274, G.275, E.277, N.297, V.298, H.301, E.302, H.305, F.320, E.324, E.331, Y.384, S.385, S.386, Y.389, R.569, K.571 Ligands: ZN.1 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:Q.142, A:Q.142, A:Y.273, A:Y.273, A:V.298, A:H.301, A:F.320, A:Y.384, A:Y.384, A:Y.389, A:Y.389, A:Y.389, A:K.571 Hydrogen bonds: A:Q.142, A:G.274, A:G.275, A:E.324, A:Y.384, A:Y.384 Water bridges: A:K.571 Salt bridges: A:R.569, A:K.571 pi-Stacking: A:H.301

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.4: 2 residues within 4Å: Chain A: D.53, N.54 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tholander, F. et al., Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design. Chem.Biol. (2008)

Release Date

2008-08-12

Peptides

Leukotriene A-4 hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Leukotriene A-4 hydrolase

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