SMTL ID : 2r8n.1

Structural Analysis of the Unbound Form of HIV-1 Subtype C Protease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: V.15, G.16, L.38, P.39, I.62, I.63 Ligands: GOL.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.16, A:I.63 GOL.2: 3 residues within 4Å: Chain A: G.16, G.17 Ligands: GOL.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.16 GOL.3: 7 residues within 4Å: Chain B: V.15, G.16, L.38, P.39, I.62, I.63 Ligands: GOL.4 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.16, B:I.63 GOL.4: 3 residues within 4Å: Chain B: G.16, G.17 Ligands: GOL.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coman, R.M. et al., High-resolution structure of unbound human immunodeficiency virus 1 subtype C protease: implications of flap dynamics and drug resistance. Acta Crystallogr.,Sect.D (2008)

Release Date

2008-07-29

Peptides

Pol protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Pol protein

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