SMTL ID : 2rd6.1

PARP complexed with A861695

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-hexamer

Ligands

6 x 78P: (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium(Non-covalent)

78P.1: 11 residues within 4Å: Chain A: H.201, G.202, G.227, Y.228, Y.235, F.236, A.237, K.242, S.243, Y.246, E.327 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.228, A:Y.235, A:Y.235, A:Y.235, A:A.237, A:K.242, A:Y.246, A:Y.246, A:E.327 Hydrogen bonds: A:G.202, A:G.202 pi-Stacking: A:Y.246 78P.2: 11 residues within 4Å: Chain B: H.201, G.202, G.227, Y.228, Y.235, F.236, A.237, K.242, S.243, Y.246, E.327 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:Y.228, B:Y.235, B:Y.235, B:Y.235, B:A.237, B:K.242, B:Y.246, B:Y.246, B:E.327 Hydrogen bonds: B:G.202, B:G.202 pi-Stacking: B:Y.246 78P.3: 11 residues within 4Å: Chain C: H.201, G.202, G.227, Y.228, Y.235, F.236, A.237, K.242, S.243, Y.246, E.327 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:Y.228, C:Y.235, C:Y.235, C:Y.235, C:A.237, C:K.242, C:Y.246, C:Y.246, C:E.327 Hydrogen bonds: C:G.202, C:G.202 pi-Stacking: C:Y.246 78P.4: 11 residues within 4Å: Chain D: H.201, G.202, G.227, Y.228, Y.235, F.236, A.237, K.242, S.243, Y.246, E.327 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:Y.228, D:Y.235, D:Y.235, D:Y.235, D:A.237, D:K.242, D:Y.246, D:Y.246, D:E.327 Hydrogen bonds: D:G.202, D:G.202 pi-Stacking: D:Y.246 78P.5: 11 residues within 4Å: Chain E: H.201, G.202, G.227, Y.228, Y.235, F.236, A.237, K.242, S.243, Y.246, E.327 12 PLIP interactions: 12 interactions with chain E Hydrophobic interactions: E:Y.228, E:Y.235, E:Y.235, E:Y.235, E:A.237, E:K.242, E:Y.246, E:Y.246, E:E.327 Hydrogen bonds: E:G.202, E:G.202 pi-Stacking: E:Y.246 78P.6: 11 residues within 4Å: Chain F: H.201, G.202, G.227, Y.228, Y.235, F.236, A.237, K.242, S.243, Y.246, E.327 12 PLIP interactions: 12 interactions with chain F Hydrophobic interactions: F:Y.228, F:Y.235, F:Y.235, F:Y.235, F:A.237, F:K.242, F:Y.246, F:Y.246, F:E.327 Hydrogen bonds: F:G.202, F:G.202 pi-Stacking: F:Y.246

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, C.H., PARP complexed with A861695. To be Published

Release Date

2008-09-23

Peptides

Poly [ADP-ribose] polymerase 1: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

Poly [ADP-ribose] polymerase 1

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