SMTL ID : 2rhi.1

Crystal structure of the 3-MBT domain from human L3MBTL1 in complex with H1.5K27me2 at 1.66 angstrom

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x THR- LYS- MLY: Histone H1.5(Non-covalent)

THR-LYS-MLY.1: 7 residues within 4Å: Chain A: D.164, N.167, L.170, C.172, F.188, W.191, Y.195 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.170, A:W.191 Hydrogen bonds: A:Y.195 Water bridges: A:N.167 Salt bridges: A:D.164 pi-Cation interactions: A:W.191, A:W.191

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 6 residues within 4Å: Chain A: D.268, R.270, R.276, F.292, W.295, Y.299 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.268, A:R.270 Water bridges: A:R.270, A:R.270, A:R.276, A:R.276, A:R.276

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 6 residues within 4Å: Chain A: T.41, H.42, N.43, K.44, K.318, T.319 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, H. et al., Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger. Mol.Cell (2007)

Release Date

2007-12-11

Peptides

Lethal(3)malignant brain tumor-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lethal(3)malignant brain tumor-like protein

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