SMTL ID : 2rke.1

The Structure of rat cytosolic PEPCK in complex with sulfoacetate.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 3 residues within 4Å: Chain A: K.246, H.266, D.313 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.266, A:D.313, H2O.6, H2O.6, H2O.7 MN.2: 2 residues within 4Å: Chain A: H.504, E.609 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.504, A:E.609, H2O.17

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 3 residues within 4Å: Chain A: V.67, L.81, N.210 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.81, A:N.210

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 5 residues within 4Å: Chain A: P.287, G.291, K.292, T.293, V.337 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.291, A:K.292, A:T.293 Water bridges: A:T.293, A:T.293, A:N.294, A:R.407

1 x SAT: sulfoacetic acid(Non-covalent)

SAT.5: 10 residues within 4Å: Chain A: A.88, R.89, Y.237, G.238, G.239, K.245, K.246, F.335, N.405, R.407 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:R.89, A:G.239, A:N.405, A:N.405 Water bridges: A:R.89, A:R.407, A:R.407 Salt bridges: A:R.89, A:R.89, A:K.246, A:R.407, A:R.407

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stiffin, R.M. et al., Differential Inhibition of Cytosolic PEPCK by Substrate Analogues. Kinetic and Structural Characterization of Inhibitor Recognition. Biochemistry (2008)

Release Date

2008-01-29

Peptides

Phosphoenolpyruvate carboxykinase, cytosolic [GTP]: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoenolpyruvate carboxykinase, cytosolic [GTP]

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