- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- hetero-6-6-mer
- Ligands
- 5 x CYC: PHYCOCYANOBILIN(Covalent)(Non-covalent)
- 13 x BLA: BILIVERDINE IX ALPHA(Non-covalent)
BLA.2: 17 residues within 4Å:- Chain B: L.66, N.72, A.73, R.78, C.82, R.84, D.85, M.86, I.88, R.108, C.109, L.113, Y.117, L.120, T.122, S.126, V.127
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:L.66, B:R.78, B:I.88, B:L.113, B:L.120, B:T.122, B:V.127
- Hydrogen bonds: B:N.72, B:R.84, B:D.85
- Salt bridges: B:R.84
- pi-Cation interactions: B:R.84
BLA.3: 17 residues within 4Å:- Chain A: I.24, F.28
- Chain B: N.35, K.36, D.39, V.40, N.42, V.142, I.148, T.149, P.150, G.151, D.152, C.153
- Chain K: Q.33, D.145, V.148
13 PLIP interactions:9 interactions with chain B, 3 interactions with chain K, 1 interactions with chain A- Hydrophobic interactions: B:D.39, B:V.40, B:I.148, B:T.149, K:V.148, A:I.24
- Hydrogen bonds: B:D.39, B:T.149, B:T.149, B:G.151, B:C.153, K:Q.33, K:D.145
BLA.5: 14 residues within 4Å:- Chain D: L.66, N.72, A.73, R.78, C.82, R.84, D.85, I.88, R.108, Y.117, L.120, T.122, S.126, V.127
9 PLIP interactions:9 interactions with chain D- Hydrophobic interactions: D:L.66, D:L.120, D:T.122, D:V.127
- Hydrogen bonds: D:N.72, D:R.84, D:D.85
- Salt bridges: D:R.84
- pi-Cation interactions: D:R.84
BLA.6: 17 residues within 4Å:- Chain C: F.28
- Chain D: A.32, N.35, D.39, N.42, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153
- Chain I: Q.33, D.145, V.148, E.149
15 PLIP interactions:10 interactions with chain D, 4 interactions with chain I, 1 interactions with chain C- Hydrophobic interactions: D:N.35, D:V.142, D:I.148, D:I.148, D:T.149, I:V.148, I:E.149, C:F.28
- Hydrogen bonds: D:D.39, D:T.149, D:T.149, D:G.151, D:C.153, I:Q.33, I:D.145
BLA.8: 14 residues within 4Å:- Chain F: L.66, N.72, A.73, R.78, C.82, R.84, D.85, I.88, R.108, Y.117, L.120, T.122, S.126, V.127
9 PLIP interactions:9 interactions with chain F- Hydrophobic interactions: F:L.66, F:L.120, F:T.122, F:V.127
- Hydrogen bonds: F:N.72, F:R.84, F:D.85
- Salt bridges: F:R.84
- pi-Cation interactions: F:R.84
BLA.9: 17 residues within 4Å:- Chain E: I.24, F.28
- Chain F: N.35, K.36, D.39, N.42, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153
- Chain G: Q.33, D.145, V.148
14 PLIP interactions:3 interactions with chain G, 9 interactions with chain F, 2 interactions with chain E- Hydrophobic interactions: G:V.148, F:N.42, F:V.142, F:I.148, F:T.149, E:I.24, E:F.28
- Hydrogen bonds: G:Q.33, G:D.145, F:D.39, F:T.149, F:T.149, F:G.151, F:C.153
BLA.11: 14 residues within 4Å:- Chain H: N.72, A.73, R.78, C.82, R.84, D.85, M.86, I.88, R.108, Y.117, L.120, T.122, S.126, V.127
9 PLIP interactions:9 interactions with chain H- Hydrophobic interactions: H:Y.117, H:L.120, H:T.122, H:V.127
- Hydrogen bonds: H:N.72, H:R.84, H:D.85
- Salt bridges: H:R.84
- pi-Cation interactions: H:R.84
BLA.12: 18 residues within 4Å:- Chain E: Q.33, D.145, V.148, E.149
- Chain G: F.28
- Chain H: A.32, N.35, D.39, N.42, R.43, V.142, D.144, I.148, T.149, P.150, G.151, D.152, C.153
15 PLIP interactions:10 interactions with chain H, 5 interactions with chain E- Hydrophobic interactions: H:V.142, H:I.148, H:T.149, E:V.148, E:E.149
- Hydrogen bonds: H:N.35, H:K.36, H:D.39, H:T.149, H:T.149, H:G.151, H:C.153, E:Q.33, E:D.145, E:D.145
BLA.13: 22 residues within 4Å:- Chain I: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, K.83, C.84, R.86, D.87, Y.90, Y.110, L.111, F.122, L.124, W.128, Y.129
- Chain L: R.57, I.67, T.75, S.76
21 PLIP interactions:3 interactions with chain L, 18 interactions with chain I- Hydrogen bonds: L:T.75, I:N.73, I:R.79, I:R.86, I:D.87, I:Y.129
- Water bridges: L:A.73
- Salt bridges: L:R.57, I:K.83, I:R.86
- Hydrophobic interactions: I:V.59, I:T.66, I:L.111, I:L.111, I:F.122, I:L.124, I:L.124, I:W.128, I:W.128
- pi-Stacking: I:Y.90
- pi-Cation interactions: I:R.86
BLA.14: 19 residues within 4Å:- Chain J: L.66, N.72, A.73, T.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, Y.92, R.108, C.109, Y.117, L.120, T.122, S.126, V.127
12 PLIP interactions:12 interactions with chain J- Hydrophobic interactions: J:A.81, J:I.88, J:L.120, J:T.122, J:V.127
- Hydrogen bonds: J:N.72, J:T.77, J:R.84, J:D.85
- Water bridges: J:R.84
- Salt bridges: J:R.84
- pi-Cation interactions: J:R.84
BLA.15: 17 residues within 4Å:- Chain C: Q.33, D.145, V.148
- Chain I: I.24, F.28
- Chain J: N.35, K.36, D.39, N.42, V.142, D.144, P.145, I.148, T.149, P.150, G.151, C.153
13 PLIP interactions:10 interactions with chain J, 1 interactions with chain I, 2 interactions with chain C- Hydrophobic interactions: J:N.35, J:K.36, J:D.39, J:I.148, J:T.149, I:I.24, C:V.148
- Hydrogen bonds: J:D.39, J:T.149, J:G.151, J:G.151, J:C.153, C:Q.33
BLA.17: 16 residues within 4Å:- Chain L: L.59, L.66, N.72, A.73, R.78, C.82, R.84, D.85, M.86, I.88, R.108, Y.117, L.120, T.122, S.126, V.127
11 PLIP interactions:11 interactions with chain L- Hydrophobic interactions: L:L.59, L:L.66, L:I.88, L:L.120, L:T.122, L:V.127
- Hydrogen bonds: L:N.72, L:R.84, L:D.85
- Salt bridges: L:R.84
- pi-Cation interactions: L:R.84
BLA.18: 17 residues within 4Å:- Chain A: Q.33, D.145, V.148, E.149
- Chain K: F.28
- Chain L: N.35, D.39, V.40, N.42, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153
14 PLIP interactions:8 interactions with chain L, 5 interactions with chain A, 1 interactions with chain K- Hydrophobic interactions: L:V.40, L:V.142, L:I.148, L:T.149, A:V.148, A:E.149, K:F.28
- Hydrogen bonds: L:D.39, L:T.149, L:G.151, L:C.153, A:Q.33, A:D.145, A:D.145
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Satyanarayana, L. et al., Crystal Structure of C-Phycocyanin from Phormidium, Lyngbya Spp. (Marine) and Spirulina Sp. (Fresh Water) Shows Two Different Ways of Energy Transfer between Two Hexamers. To be Published
- Release Date
- 2008-05-27
- Peptides
- C-PHYCOCYANIN ALPHA CHAIN: ACEGIK
C-PHYCOCYANIN BETA CHAIN: BDFHJL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EG
GI
IK
KB
BD
DF
FH
HJ
JL
L
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- hetero-6-6-mer
- Ligands
- 5 x CYC: PHYCOCYANOBILIN(Covalent)(Non-covalent)
- 13 x BLA: BILIVERDINE IX ALPHA(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Satyanarayana, L. et al., Crystal Structure of C-Phycocyanin from Phormidium, Lyngbya Spp. (Marine) and Spirulina Sp. (Fresh Water) Shows Two Different Ways of Energy Transfer between Two Hexamers. To be Published
- Release Date
- 2008-05-27
- Peptides
- C-PHYCOCYANIN ALPHA CHAIN: ACEGIK
C-PHYCOCYANIN BETA CHAIN: BDFHJL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EG
GI
IK
KB
BD
DF
FH
HJ
JL
L