SMTL ID : 2uv2.1

Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(5- Cyclopropyl-1H-pyrazol-3-ylamino)-quinazolin-2-ylamino)-phenyl)- acetonitrile

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: H.152, P.216, Y.219, K.220, V.223, T.287, T.288 Ligands: EDO.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.152, A:T.288 EDO.2: 7 residues within 4Å: Chain A: V.139, K.142, Q.143, V.299, D.300, S.301, N.302 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.143 EDO.3: 7 residues within 4Å: Chain A: H.152, K.155, D.214, R.215, P.216, Y.219 Ligands: EDO.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.155, A:K.155 EDO.4: 4 residues within 4Å: Chain A: P.94, N.95, Q.143, D.173 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.95 Water bridges: A:P.94, A:I.174 EDO.5: 3 residues within 4Å: Chain A: Q.138, P.295, T.298 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.138, A:P.295, A:T.298 Water bridges: A:N.269 EDO.9: 8 residues within 4Å: Chain B: H.152, P.216, Y.219, K.220, V.223, T.287, T.288 Ligands: EDO.11 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.288 EDO.10: 7 residues within 4Å: Chain B: V.139, K.142, Q.143, V.299, D.300, S.301, N.302 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.143 EDO.11: 7 residues within 4Å: Chain B: H.152, K.155, D.214, R.215, P.216, Y.219 Ligands: EDO.9 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.155, B:K.155 EDO.12: 4 residues within 4Å: Chain B: P.94, N.95, Q.143, D.173 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.95 Water bridges: B:P.94, B:I.174 EDO.13: 3 residues within 4Å: Chain B: Q.138, P.295, T.298 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.138, B:P.295 Water bridges: B:N.269

4 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.6: 4 residues within 4Å: Chain A: L.243, R.247, L.250, K.254 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.251 SCN.7: 6 residues within 4Å: Chain A: K.68, V.97, I.113, A.177, D.178 Ligands: GVD.8 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.178 Water bridges: A:F.179 SCN.14: 4 residues within 4Å: Chain B: L.243, R.247, L.250, K.254 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.251 SCN.15: 6 residues within 4Å: Chain B: K.68, V.97, I.113, A.177, D.178 Ligands: GVD.16 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.178 Water bridges: B:F.179

2 x GVD: [4-({4-[(5-CYCLOPROPYL-1H-PYRAZOL-3-YL)AMINO]QUINAZOLIN-2-YL}IMINO)CYCLOHEXA-2,5-DIEN-1-YL]ACETONITRILE(Non-covalent)

GVD.8: 14 residues within 4Å: Chain A: L.45, A.66, I.113, E.114, F.115, C.116, A.117, G.119, G.164, N.165, L.167, A.177, D.178 Ligands: SCN.7 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.45, A:A.66, A:I.113, A:F.115, A:L.167, A:L.167, A:A.177 Hydrogen bonds: A:E.114, A:C.116, A:C.116 GVD.16: 14 residues within 4Å: Chain B: L.45, A.66, I.113, E.114, F.115, C.116, A.117, G.119, G.164, N.165, L.167, A.177, D.178 Ligands: SCN.15 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:L.45, B:A.66, B:I.113, B:F.115, B:L.167, B:L.167, B:A.177 Hydrogen bonds: B:E.114, B:C.116, B:C.116 Water bridges: B:D.178

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pike, A.C.W. et al., Activation Segment Dimerization: A Mechanism for Kinase Autophosphorylation of Non-Consensus Sites. Embo J. (2008)

Release Date

2007-03-20

Peptides

STE20-LIKE SERINE-THREONINE KINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

STE20-LIKE SERINE-THREONINE KINASE

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