SMTL ID : 2uyu.1 (1 other biounit)

L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A88F- E192A)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

homo-octamer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.141, H.143, H.212 Chain C: E.171 5 PLIP interactions: 3 interactions with chain A, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: A:H.141, A:H.143, A:H.212, C:E.171, H2O.7 ZN.3: 4 residues within 4Å: Chain A: E.171 Chain B: H.141, H.143, H.212 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:H.141, B:H.143, B:H.212, A:E.171, H2O.13 ZN.5: 4 residues within 4Å: Chain C: H.141, H.143, H.212 Chain F: E.171 5 PLIP interactions: 1 interactions with chain F, 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: F:E.171, C:H.141, C:H.143, C:H.212, H2O.20 ZN.7: 4 residues within 4Å: Chain D: H.141, H.143, H.212 Chain E: E.171 5 PLIP interactions: 3 interactions with chain D, 1 interactions with chain E, 1 Ligand-Water interactions Metal complexes: D:H.141, D:H.143, D:H.212, E:E.171, H2O.26 ZN.9: 4 residues within 4Å: Chain E: H.141, H.143, H.212 Chain H: E.171 5 PLIP interactions: 3 interactions with chain E, 1 interactions with chain H, 1 Ligand-Water interactions Metal complexes: E:H.141, E:H.143, E:H.212, H:E.171, H2O.33 ZN.11: 4 residues within 4Å: Chain B: E.171 Chain F: H.141, H.143, H.212 5 PLIP interactions: 3 interactions with chain F, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: F:H.141, F:H.143, F:H.212, B:E.171, H2O.39 ZN.13: 4 residues within 4Å: Chain D: E.171 Chain G: H.141, H.143, H.212 5 PLIP interactions: 3 interactions with chain G, 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: G:H.141, G:H.143, G:H.212, D:E.171, H2O.45 ZN.15: 4 residues within 4Å: Chain G: E.171 Chain H: H.141, H.143, H.212 5 PLIP interactions: 3 interactions with chain H, 1 interactions with chain G, 1 Ligand-Water interactions Metal complexes: H:H.141, H:H.143, H:H.212, G:E.171, H2O.52

8 x FE: FE (III) ION(Non-covalent)

FE.2: 3 residues within 4Å: Chain A: T.158, E.200, H.204 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.204, H2O.5, H2O.5, H2O.5 FE.4: 3 residues within 4Å: Chain B: T.158, E.200, H.204 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:H.204, H2O.12, H2O.12, H2O.12 FE.6: 3 residues within 4Å: Chain C: T.158, E.200, H.204 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:H.204, H2O.18, H2O.18, H2O.18 FE.8: 3 residues within 4Å: Chain D: T.158, E.200, H.204 4 PLIP interactions: 1 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:H.204, H2O.24, H2O.25, H2O.25 FE.10: 3 residues within 4Å: Chain E: T.158, E.200, H.204 4 PLIP interactions: 1 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:H.204, H2O.31, H2O.31, H2O.31 FE.12: 3 residues within 4Å: Chain F: T.158, E.200, H.204 4 PLIP interactions: 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:H.204, H2O.37, H2O.37, H2O.37 FE.14: 3 residues within 4Å: Chain G: T.158, E.200, H.204 4 PLIP interactions: 1 interactions with chain G, 3 Ligand-Water interactions Metal complexes: G:H.204, H2O.44, H2O.44, H2O.44 FE.16: 3 residues within 4Å: Chain H: T.158, E.200, H.204 4 PLIP interactions: 1 interactions with chain H, 3 Ligand-Water interactions Metal complexes: H:H.204, H2O.50, H2O.50, H2O.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grueninger, D. et al., Designed Protein-Protein Association. Science (2008)

Release Date

2008-01-15

Peptides

RHAMNULOSE-1-PHOSPHATE ALDOLASE: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

RHAMNULOSE-1-PHOSPHATE ALDOLASE

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