SMTL ID : 2uyu.2 (1 other biounit)

L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A88F- E192A)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

homo-octamer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.141, H.143, H.212 Chain B: E.171 5 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:H.141, A:H.143, A:H.212, B:E.171, H2O.7 ZN.3: 4 residues within 4Å: Chain B: H.141, H.143, H.212 Chain F: E.171 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain F, 1 Ligand-Water interactions Metal complexes: B:H.141, B:H.143, B:H.212, F:E.171, H2O.14 ZN.5: 4 residues within 4Å: Chain A: E.171 Chain C: H.141, H.143, H.212 5 PLIP interactions: 3 interactions with chain C, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: C:H.141, C:H.143, C:H.212, A:E.171, H2O.21 ZN.7: 4 residues within 4Å: Chain D: H.141, H.143, H.212 Chain G: E.171 5 PLIP interactions: 3 interactions with chain D, 1 interactions with chain G, 1 Ligand-Water interactions Metal complexes: D:H.141, D:H.143, D:H.212, G:E.171, H2O.27 ZN.9: 4 residues within 4Å: Chain D: E.171 Chain E: H.141, H.143, H.212 5 PLIP interactions: 3 interactions with chain E, 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: E:H.141, E:H.143, E:H.212, D:E.171, H2O.34 ZN.11: 4 residues within 4Å: Chain C: E.171 Chain F: H.141, H.143, H.212 5 PLIP interactions: 3 interactions with chain F, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: F:H.141, F:H.143, F:H.212, C:E.171, H2O.41 ZN.13: 4 residues within 4Å: Chain G: H.141, H.143, H.212 Chain H: E.171 5 PLIP interactions: 3 interactions with chain G, 1 interactions with chain H, 1 Ligand-Water interactions Metal complexes: G:H.141, G:H.143, G:H.212, H:E.171, H2O.47 ZN.15: 4 residues within 4Å: Chain E: E.171 Chain H: H.141, H.143, H.212 5 PLIP interactions: 1 interactions with chain E, 3 interactions with chain H, 1 Ligand-Water interactions Metal complexes: E:E.171, H:H.141, H:H.143, H:H.212, H2O.54

8 x FE: FE (III) ION(Non-covalent)

FE.2: 1 residues within 4Å: Chain A: H.204 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.204, H2O.5, H2O.5, H2O.5 FE.4: 1 residues within 4Å: Chain B: H.204 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:H.204, H2O.12, H2O.12, H2O.12 FE.6: 1 residues within 4Å: Chain C: H.204 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:H.204, H2O.19, H2O.19, H2O.19 FE.8: 1 residues within 4Å: Chain D: H.204 4 PLIP interactions: 1 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:H.204, H2O.25, H2O.25, H2O.25 FE.10: 1 residues within 4Å: Chain E: H.204 4 PLIP interactions: 1 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:H.204, H2O.32, H2O.32, H2O.32 FE.12: 1 residues within 4Å: Chain F: H.204 4 PLIP interactions: 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:H.204, H2O.39, H2O.39, H2O.39 FE.14: 1 residues within 4Å: Chain G: H.204 4 PLIP interactions: 1 interactions with chain G, 3 Ligand-Water interactions Metal complexes: G:H.204, H2O.45, H2O.45, H2O.45 FE.16: 1 residues within 4Å: Chain H: H.204 4 PLIP interactions: 1 interactions with chain H, 3 Ligand-Water interactions Metal complexes: H:H.204, H2O.52, H2O.52, H2O.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grueninger, D. et al., Designed Protein-Protein Association. Science (2008)

Release Date

2008-01-15

Peptides

RHAMNULOSE-1-PHOSPHATE ALDOLASE: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
E

C
E

D
E

E
E

F
E

G
E

H
E

RHAMNULOSE-1-PHOSPHATE ALDOLASE

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