SMTL ID : 2vin.1

Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 8 residues within 4Å: Chain A: V.30, H.46, Y.150, Q.195, G.196, D.197, S.198 Ligands: 505.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Q.195 Hydrogen bonds: A:G.196, A:S.198, A:S.198 Water bridges: A:H.46, A:Q.195 Salt bridges: A:H.46

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: H.95, T.178, K.180, M.181 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.178 Water bridges: A:N.96, A:N.96 Salt bridges: A:H.95, A:K.180

1 x 505: (2R)-1-(2,6-dimethylphenoxy)propan-2-amine

505.3: 12 residues within 4Å: Chain A: D.192, S.193, C.194, Q.195, S.198, V.216, W.218, G.219, G.221, C.222, G.229 Ligands: ACT.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Q.195, A:V.216 Hydrogen bonds: A:D.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frederickson, M. et al., Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator. J.Med.Chem. (2008)

Release Date

2008-01-22

Peptides

UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B

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