SMTL ID : 2vsy.1 (1 other biounit)

XANTHOMONAS CAMPESTRIS PUTATIVE OGT (XCC0866), APOSTRUCTURE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)

NHE.1: 8 residues within 4Å: Chain A: A.363, E.364, P.365, P.366, P.445, Q.446, A.449, R.450 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.450, A:R.450 Salt bridges: A:R.450

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 5 residues within 4Å: Chain A: V.362, R.452, W.474, T.475, R.537 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.452, A:R.452 Water bridges: A:T.475, A:R.537 PEG.3: 5 residues within 4Å: Chain A: D.455, P.523, T.527, H.530 Ligands: PR.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.530

2 x PR: PRASEODYMIUM ION(Non-covalent)

PR.4: 1 residues within 4Å: Chain A: E.364 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.364, H2O.5, H2O.21, H2O.96 PR.5: 2 residues within 4Å: Chain A: D.455 Ligands: PEG.3 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.455, H2O.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clarke, A.J. et al., Structural Insights Into Mechanism and Specificity of O-Glcnac Transferase. Embo J. (2008)

Release Date

2008-11-18

Peptides

XCC0866: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

XCC0866

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