SMTL ID : 2vtw.2 (1 other biounit)

Structure of the C-terminal head domain of the fowl adenovirus type 1 short fibre

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.78, F.79, L.80, T.81, Q.82 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.78, A:L.80, A:T.81, A:T.81, A:Q.82 SO4.2: 2 residues within 4Å: Chain A: R.127 Chain B: R.135 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Water bridges: B:R.135, A:R.127 Salt bridges: B:R.135, A:R.127 SO4.4: 5 residues within 4Å: Chain B: S.78, F.79, L.80, T.81, Q.82 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.78, B:L.80, B:T.81, B:T.81, B:Q.82 SO4.5: 5 residues within 4Å: Chain C: S.78, F.79, L.80, T.81, Q.82 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:L.80, C:T.81, C:Q.82 Water bridges: C:Q.82, C:Q.82 SO4.6: 2 residues within 4Å: Chain C: R.135, S.146 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:S.146, C:S.146 Salt bridges: C:R.135

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: S.24, N.68, A.69, R.70, Y.71 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.24, A:R.70, A:R.70, A:Y.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

El Bakkouri, M. et al., Structure of the C-Terminal Head Domain of the Fowl Adenovirus Type 1 Short Fibre. Virology (2008)

Release Date

2008-06-17

Peptides

FIBER PROTEIN 2: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

FIBER PROTEIN 2

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