SMTL ID : 2w8c.2 (2 other biounits)

Plastocyanin variant with N-terminal Methionine - closed structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-trimer

Ligands

3 x CU: COPPER (II) ION(Non-covalent)

CU.1: 5 residues within 4Å: Chain A: P.39, H.40, C.90, H.93, M.98 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.40, A:C.90, A:H.93 CU.4: 5 residues within 4Å: Chain B: P.39, H.40, C.90, H.93, M.98 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.40, B:C.90, B:H.93 CU.7: 5 residues within 4Å: Chain C: P.39, H.40, C.90, H.93, M.98 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:H.40, C:C.90, C:H.93

6 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: D.45, D.46 Chain C: H.62 5 PLIP interactions: 1 interactions with chain C, 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: C:H.62, A:D.45, A:D.46, H2O.4, H2O.4 ZN.3: 2 residues within 4Å: Chain A: H.25, E.105 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.25, H2O.4 ZN.5: 3 residues within 4Å: Chain A: H.62 Chain B: D.45, D.46 5 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: A:H.62, B:D.45, B:D.46, H2O.7, H2O.7 ZN.6: 2 residues within 4Å: Chain B: H.25, E.105 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.25, H2O.7 ZN.8: 3 residues within 4Å: Chain B: H.62 Chain C: D.45, D.46 5 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C, 2 Ligand-Water interactions Metal complexes: B:H.62, C:D.45, C:D.46, H2O.11, H2O.11 ZN.9: 2 residues within 4Å: Chain C: H.25, E.105 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.25, H2O.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crowley, P.B. et al., Metal-Mediated Self-Assembly of a Beta-Sandwich Protein. Chemistry (2009)

Release Date

2009-10-27

Peptides

PLASTOCYANIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

PLASTOCYANIN

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