SMTL ID : 2w8p.1 (2 other biounits)

The crystal structure of human C340A SSADH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-12-mer

Ligands

96 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.2: 4 residues within 4Å: Chain A: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.3: 3 residues within 4Å: Chain A: F.234, S.237, T.240 Ligand excluded by PLIP SO4.4: 3 residues within 4Å: Chain A: R.20 Chain C: L.3, S.35 Ligand excluded by PLIP SO4.5: 2 residues within 4Å: Chain A: R.302, K.400 Ligand excluded by PLIP SO4.6: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.7: 7 residues within 4Å: Chain A: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.9 Ligand excluded by PLIP SO4.8: 3 residues within 4Å: Chain A: G.19, R.20, W.21 Ligand excluded by PLIP SO4.12: 4 residues within 4Å: Chain B: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.13: 4 residues within 4Å: Chain B: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.14: 3 residues within 4Å: Chain B: F.234, S.237, T.240 Ligand excluded by PLIP SO4.15: 3 residues within 4Å: Chain B: R.20 Chain I: L.3, S.35 Ligand excluded by PLIP SO4.16: 2 residues within 4Å: Chain B: R.302, K.400 Ligand excluded by PLIP SO4.17: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.18: 7 residues within 4Å: Chain B: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.20 Ligand excluded by PLIP SO4.19: 3 residues within 4Å: Chain B: G.19, R.20, W.21 Ligand excluded by PLIP SO4.23: 4 residues within 4Å: Chain C: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.24: 4 residues within 4Å: Chain C: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.25: 3 residues within 4Å: Chain C: F.234, S.237, T.240 Ligand excluded by PLIP SO4.26: 3 residues within 4Å: Chain C: R.20 Chain E: L.3, S.35 Ligand excluded by PLIP SO4.27: 2 residues within 4Å: Chain C: R.302, K.400 Ligand excluded by PLIP SO4.28: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.29: 7 residues within 4Å: Chain C: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.31 Ligand excluded by PLIP SO4.30: 3 residues within 4Å: Chain C: G.19, R.20, W.21 Ligand excluded by PLIP SO4.34: 4 residues within 4Å: Chain D: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.35: 4 residues within 4Å: Chain D: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.36: 3 residues within 4Å: Chain D: F.234, S.237, T.240 Ligand excluded by PLIP SO4.37: 3 residues within 4Å: Chain D: R.20 Chain H: L.3, S.35 Ligand excluded by PLIP SO4.38: 2 residues within 4Å: Chain D: R.302, K.400 Ligand excluded by PLIP SO4.39: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.40: 7 residues within 4Å: Chain D: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.42 Ligand excluded by PLIP SO4.41: 3 residues within 4Å: Chain D: G.19, R.20, W.21 Ligand excluded by PLIP SO4.45: 4 residues within 4Å: Chain E: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.46: 4 residues within 4Å: Chain E: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.47: 3 residues within 4Å: Chain E: F.234, S.237, T.240 Ligand excluded by PLIP SO4.48: 3 residues within 4Å: Chain A: L.3, S.35 Chain E: R.20 Ligand excluded by PLIP SO4.49: 2 residues within 4Å: Chain E: R.302, K.400 Ligand excluded by PLIP SO4.50: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.51: 7 residues within 4Å: Chain E: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.53 Ligand excluded by PLIP SO4.52: 3 residues within 4Å: Chain E: G.19, R.20, W.21 Ligand excluded by PLIP SO4.56: 4 residues within 4Å: Chain F: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.57: 4 residues within 4Å: Chain F: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.58: 3 residues within 4Å: Chain F: F.234, S.237, T.240 Ligand excluded by PLIP SO4.59: 3 residues within 4Å: Chain F: R.20 Chain K: L.3, S.35 Ligand excluded by PLIP SO4.60: 2 residues within 4Å: Chain F: R.302, K.400 Ligand excluded by PLIP SO4.61: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.62: 7 residues within 4Å: Chain F: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.64 Ligand excluded by PLIP SO4.63: 3 residues within 4Å: Chain F: G.19, R.20, W.21 Ligand excluded by PLIP SO4.67: 4 residues within 4Å: Chain G: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.68: 4 residues within 4Å: Chain G: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.69: 3 residues within 4Å: Chain G: F.234, S.237, T.240 Ligand excluded by PLIP SO4.70: 3 residues within 4Å: Chain B: L.3, S.35 Chain G: R.20 Ligand excluded by PLIP SO4.71: 2 residues within 4Å: Chain G: R.302, K.400 Ligand excluded by PLIP SO4.72: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.73: 7 residues within 4Å: Chain G: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.75 Ligand excluded by PLIP SO4.74: 3 residues within 4Å: Chain G: G.19, R.20, W.21 Ligand excluded by PLIP SO4.78: 4 residues within 4Å: Chain H: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.79: 4 residues within 4Å: Chain H: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.80: 3 residues within 4Å: Chain H: F.234, S.237, T.240 Ligand excluded by PLIP SO4.81: 3 residues within 4Å: Chain H: R.20 Chain L: L.3, S.35 Ligand excluded by PLIP SO4.82: 2 residues within 4Å: Chain H: R.302, K.400 Ligand excluded by PLIP SO4.83: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.84: 7 residues within 4Å: Chain H: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.86 Ligand excluded by PLIP SO4.85: 3 residues within 4Å: Chain H: G.19, R.20, W.21 Ligand excluded by PLIP SO4.89: 4 residues within 4Å: Chain I: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.90: 4 residues within 4Å: Chain I: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.91: 3 residues within 4Å: Chain I: F.234, S.237, T.240 Ligand excluded by PLIP SO4.92: 3 residues within 4Å: Chain G: L.3, S.35 Chain I: R.20 Ligand excluded by PLIP SO4.93: 2 residues within 4Å: Chain I: R.302, K.400 Ligand excluded by PLIP SO4.94: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.95: 7 residues within 4Å: Chain I: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.97 Ligand excluded by PLIP SO4.96: 3 residues within 4Å: Chain I: G.19, R.20, W.21 Ligand excluded by PLIP SO4.100: 4 residues within 4Å: Chain J: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.101: 4 residues within 4Å: Chain J: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.102: 3 residues within 4Å: Chain J: F.234, S.237, T.240 Ligand excluded by PLIP SO4.103: 3 residues within 4Å: Chain F: L.3, S.35 Chain J: R.20 Ligand excluded by PLIP SO4.104: 2 residues within 4Å: Chain J: R.302, K.400 Ligand excluded by PLIP SO4.105: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.106: 7 residues within 4Å: Chain J: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.108 Ligand excluded by PLIP SO4.107: 3 residues within 4Å: Chain J: G.19, R.20, W.21 Ligand excluded by PLIP SO4.111: 4 residues within 4Å: Chain K: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.112: 4 residues within 4Å: Chain K: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.113: 3 residues within 4Å: Chain K: F.234, S.237, T.240 Ligand excluded by PLIP SO4.114: 3 residues within 4Å: Chain J: L.3, S.35 Chain K: R.20 Ligand excluded by PLIP SO4.115: 2 residues within 4Å: Chain K: R.302, K.400 Ligand excluded by PLIP SO4.116: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.117: 7 residues within 4Å: Chain K: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.119 Ligand excluded by PLIP SO4.118: 3 residues within 4Å: Chain K: G.19, R.20, W.21 Ligand excluded by PLIP SO4.122: 4 residues within 4Å: Chain L: L.320, R.321, V.322, H.365 Ligand excluded by PLIP SO4.123: 4 residues within 4Å: Chain L: Q.301, D.402, T.403, E.404 Ligand excluded by PLIP SO4.124: 3 residues within 4Å: Chain L: F.234, S.237, T.240 Ligand excluded by PLIP SO4.125: 3 residues within 4Å: Chain D: L.3, S.35 Chain L: R.20 Ligand excluded by PLIP SO4.126: 2 residues within 4Å: Chain L: R.302, K.400 Ligand excluded by PLIP SO4.127: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP SO4.128: 7 residues within 4Å: Chain L: G.107, E.108, Y.111, F.158, R.286, S.450 Ligands: GOL.130 Ligand excluded by PLIP SO4.129: 3 residues within 4Å: Chain L: G.19, R.20, W.21 Ligand excluded by PLIP

36 x GOL: GLYCEROL(Non-functional Binders)

GOL.9: 8 residues within 4Å: Chain A: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.7 Ligand excluded by PLIP GOL.10: 3 residues within 4Å: Chain A: T.360, G.361, K.363 Ligand excluded by PLIP GOL.11: 3 residues within 4Å: Chain A: N.337, E.338 Chain E: R.55 Ligand excluded by PLIP GOL.20: 8 residues within 4Å: Chain B: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.18 Ligand excluded by PLIP GOL.21: 3 residues within 4Å: Chain B: T.360, G.361, K.363 Ligand excluded by PLIP GOL.22: 3 residues within 4Å: Chain B: N.337, E.338 Chain G: R.55 Ligand excluded by PLIP GOL.31: 8 residues within 4Å: Chain C: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.29 Ligand excluded by PLIP GOL.32: 3 residues within 4Å: Chain C: T.360, G.361, K.363 Ligand excluded by PLIP GOL.33: 3 residues within 4Å: Chain A: R.55 Chain C: N.337, E.338 Ligand excluded by PLIP GOL.42: 8 residues within 4Å: Chain D: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.40 Ligand excluded by PLIP GOL.43: 3 residues within 4Å: Chain D: T.360, G.361, K.363 Ligand excluded by PLIP GOL.44: 3 residues within 4Å: Chain D: N.337, E.338 Chain L: R.55 Ligand excluded by PLIP GOL.53: 8 residues within 4Å: Chain E: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.51 Ligand excluded by PLIP GOL.54: 3 residues within 4Å: Chain E: T.360, G.361, K.363 Ligand excluded by PLIP GOL.55: 3 residues within 4Å: Chain C: R.55 Chain E: N.337, E.338 Ligand excluded by PLIP GOL.64: 8 residues within 4Å: Chain F: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.62 Ligand excluded by PLIP GOL.65: 3 residues within 4Å: Chain F: T.360, G.361, K.363 Ligand excluded by PLIP GOL.66: 3 residues within 4Å: Chain F: N.337, E.338 Chain J: R.55 Ligand excluded by PLIP GOL.75: 8 residues within 4Å: Chain G: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.73 Ligand excluded by PLIP GOL.76: 3 residues within 4Å: Chain G: T.360, G.361, K.363 Ligand excluded by PLIP GOL.77: 3 residues within 4Å: Chain G: N.337, E.338 Chain I: R.55 Ligand excluded by PLIP GOL.86: 8 residues within 4Å: Chain H: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.84 Ligand excluded by PLIP GOL.87: 3 residues within 4Å: Chain H: T.360, G.361, K.363 Ligand excluded by PLIP GOL.88: 3 residues within 4Å: Chain D: R.55 Chain H: N.337, E.338 Ligand excluded by PLIP GOL.97: 8 residues within 4Å: Chain I: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.95 Ligand excluded by PLIP GOL.98: 3 residues within 4Å: Chain I: T.360, G.361, K.363 Ligand excluded by PLIP GOL.99: 3 residues within 4Å: Chain B: R.55 Chain I: N.337, E.338 Ligand excluded by PLIP GOL.108: 8 residues within 4Å: Chain J: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.106 Ligand excluded by PLIP GOL.109: 3 residues within 4Å: Chain J: T.360, G.361, K.363 Ligand excluded by PLIP GOL.110: 3 residues within 4Å: Chain J: N.337, E.338 Chain K: R.55 Ligand excluded by PLIP GOL.119: 8 residues within 4Å: Chain K: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.117 Ligand excluded by PLIP GOL.120: 3 residues within 4Å: Chain K: T.360, G.361, K.363 Ligand excluded by PLIP GOL.121: 3 residues within 4Å: Chain F: R.55 Chain K: N.337, E.338 Ligand excluded by PLIP GOL.130: 8 residues within 4Å: Chain L: Y.111, F.158, R.165, R.286, V.293, S.450, F.456 Ligands: SO4.128 Ligand excluded by PLIP GOL.131: 3 residues within 4Å: Chain L: T.360, G.361, K.363 Ligand excluded by PLIP GOL.132: 3 residues within 4Å: Chain H: R.55 Chain L: N.337, E.338 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y.-G. et al., Redox-Switch Modulation of Human Ssadh by Dynamic Catalytic Loop. Embo J. (2009)

Release Date

2009-06-09

Peptides

SUCCINIC SEMIALDEHYDE DEHYDROGENASE MITOCHONDRIAL: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

SUCCINIC SEMIALDEHYDE DEHYDROGENASE MITOCHONDRIAL

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