SMTL ID : 2w8y.2 (1 other biounit)

RU486 bound to the progesterone receptor in a destabilized agonistic conformation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x NDR: (14beta,17alpha)-17-ethynyl-17-hydroxyestr-4-en-3-one(Non-covalent)

NDR.1: 14 residues within 4Å: Chain A: L.42, L.45, N.46, L.48, Q.52, M.83, M.86, R.93, F.105, L.124, M.128, L.214, Y.217, C.218 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.42, A:L.45, A:L.48, A:M.86, A:F.105, A:Y.217, A:Y.217 Hydrogen bonds: A:Q.52, A:R.93 Water bridges: A:R.93

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: W.92, K.96, H.97, Q.142 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.97 Water bridges: A:Q.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Raaijmakers, H.C.A. et al., The X-Ray Structure of Ru486 Bound to the Progesterone Receptor in a Destabilized Agonistic Conformation. J.Biol.Chem. (2009)

Release Date

2009-04-28

Peptides

PROGESTERONE RECEPTOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

PROGESTERONE RECEPTOR

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