SMTL ID : 3zr7.1 (1 other biounit)

Structural basis for agonism and antagonism for a set of chemically related progesterone receptor modulators

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x OR8: 2-CHLORO-N-[[4-(3,5-DIMETHYLISOXAZOL-4-YL)PHENYL]METHYL]-1,4-DIMETHYL-1H-PYRAZOLE-4-SULFONAMIDE(Non-covalent)

OR8.1: 17 residues within 4Å: Chain A: L.42, L.45, N.46, L.48, G.49, Q.52, W.82, M.83, M.86, L.90, F.105, M.128, Y.217, C.218, T.221, F.232, M.236 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.42, A:L.45, A:L.48, A:W.82 Hydrogen bonds: A:N.46, A:T.221 Water bridges: A:L.90

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: Y.217, N.220, T.221, Q.224, L.228 No protein-ligand interaction detected (PLIP) GOL.4: 6 residues within 4Å: Chain A: L.14, P.64, G.65, M.171, S.174, Y.175 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.174 Water bridges: A:M.171, A:S.174 GOL.5: 6 residues within 4Å: Chain A: E.22, P.23, G.89, R.93, F.145, K.149 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.93, A:K.149, A:K.149 Water bridges: A:I.26, A:R.93 GOL.6: 6 residues within 4Å: Chain A: Y.80, S.84, T.156, H.208, H.215, I.247 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.80, A:S.84, A:S.84, A:H.208 GOL.7: 5 residues within 4Å: Chain A: V.57, I.75, Q.79, E.238, V.239 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.79, A:E.238

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: P.64, G.65, R.67, N.68 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.65, A:N.68 Salt bridges: A:R.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lusher, S.J. et al., Structural basis for agonism and antagonism for a set of chemically related progesterone receptor modulators. J. Biol. Chem. (2011)

Release Date

2011-08-17

Peptides

PROGESTERONE RECEPTOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROGESTERONE RECEPTOR

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