SMTL ID : 2wbj.1 (1 other biounit)

TCR complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.78 No protein-ligand interaction detected (PLIP) NAG.2: 2 residues within 4Å: Chain B: N.19, E.22 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.22

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 5 residues within 4Å: Chain B: E.22, R.23, V.24, V.75, R.80 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:V.24 Salt bridges: B:R.80 SO4.4: 6 residues within 4Å: Chain C: P.112, N.113, I.114, D.141, S.142, Q.143 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:I.114, C:D.141, C:S.142, C:Q.143, C:Q.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harkiolaki, M. et al., T Cell-Mediated Autoimmune Disease due to Low-Affinity Crossreactivity to Common Microbial Peptides. Immunity (2009)

Release Date

2009-04-07

Peptides

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN: A
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-15 BETA CHAIN: B
OB TCR: C
OB TCR: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN

HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-15 BETA CHAIN

OB TCR

OB TCR

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