SMTL ID : 2wew.1

Crystal structure of human apoM in complex with myristic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 15 residues within 4Å: Chain A: H.27, W.31, F.55, M.57, L.66, L.68, W.84, Y.86, L.107, I.116, L.118, E.120, R.127, L.129, Y.131 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.31, A:W.31, A:F.55, A:F.55, A:L.66, A:L.68, A:L.107, A:I.116 Hydrogen bonds: A:E.120 Salt bridges: A:R.127

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: H.136, P.137, E.139, V.142, L.159, R.162 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.136, A:E.139, A:E.139, A:R.162, A:R.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sevvana, M. et al., Serendipitous Fatty Acid Binding Reveals the Structural Determinants for Ligand Recognition in Apolipoprotein M. J.Mol.Biol. (2009)

Release Date

2009-09-15

Peptides

APOLIPOPROTEIN M: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

APOLIPOPROTEIN M

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