- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x ACT: ACETATE ION(Non-functional Binders)
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 3 residues within 4Å:- Chain A: A.62, D.63, A.84
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.63
EDO.4: 3 residues within 4Å:- Chain A: M.5, A.25, T.26
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:M.5, A:A.25
EDO.5: 5 residues within 4Å:- Chain A: K.154, G.155, Y.171, K.172, S.173
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.154, A:S.173, A:S.173
- Water bridges: A:S.173
EDO.6: 6 residues within 4Å:- Chain A: N.34, N.35, S.36, N.56, I.57, T.58
No protein-ligand interaction detected (PLIP)EDO.8: 3 residues within 4Å:- Chain A: M.199
- Chain B: A.96, E.97
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.97
- Water bridges: B:K.98
EDO.9: 5 residues within 4Å:- Chain B: N.90, G.91, E.92, G.112, Y.113
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.92, B:Y.113
EDO.12: 5 residues within 4Å:- Chain A: M.120
- Chain C: R.197, K.198, M.199, Y.200
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain C- Hydrogen bonds: A:M.120, C:M.199, C:Y.200
- Water bridges: A:H.121
- 3 x ACO: ACETYL COENZYME *A(Non-covalent)
ACO.7: 24 residues within 4Å:- Chain A: R.116, D.119, M.120, H.121, I.123, N.133, L.153, K.154, Y.171, K.172
- Chain C: M.108, A.110, W.145, G.147, R.148, V.163, G.165, S.166, V.180, A.182, G.183, V.189, K.190
- Ligands: ACT.11
25 PLIP interactions:8 interactions with chain C, 17 interactions with chain A- Hydrophobic interactions: C:V.163, C:V.180, A:I.123
- Hydrogen bonds: C:R.148, C:S.166, C:G.183, A:D.119, A:D.119
- Water bridges: C:S.184, A:R.116, A:K.154, A:K.154, A:K.154, A:K.154, A:K.154, A:K.154, A:S.184, A:S.184
- Salt bridges: C:K.190, C:K.190, A:K.154, A:K.154, A:K.172
- pi-Stacking: A:Y.171, A:Y.171
ACO.10: 19 residues within 4Å:- Chain A: M.108, A.110, W.145, G.147, R.148, V.163, G.165, S.166, V.180, G.183, V.189
- Chain B: R.116, D.119, H.121, I.123, N.133, K.154, Y.171, K.172
14 PLIP interactions:9 interactions with chain B, 5 interactions with chain A- Hydrophobic interactions: B:I.123, A:V.163, A:V.180
- Hydrogen bonds: B:D.119, B:D.119, A:R.148, A:S.166, A:G.183
- Water bridges: B:Y.171
- Salt bridges: B:K.154, B:K.154, B:K.172
- pi-Stacking: B:Y.171, B:Y.171
ACO.13: 20 residues within 4Å:- Chain B: M.108, A.110, W.145, G.147, R.148, V.163, G.165, S.166, V.180, G.183, V.189, K.190
- Chain C: R.116, D.119, H.121, I.123, N.133, L.153, K.154, Y.171
22 PLIP interactions:13 interactions with chain B, 9 interactions with chain C- Hydrophobic interactions: B:A.110, B:W.145, B:V.163, B:V.180
- Hydrogen bonds: B:R.148, B:S.166, B:G.183, C:D.119, C:D.119
- Water bridges: B:R.148, B:S.166, B:S.184, B:S.184, C:I.132, C:S.184, C:S.184
- Salt bridges: B:K.190, B:K.190, C:K.154, C:K.154
- pi-Stacking: C:Y.171, C:Y.171
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, H.J. et al., Structural and Kinetic Characterizations of the Polysialic Acid O-Acetyltransferase Oatwy from Neisseria Meningitidis. J.Biol.Chem. (2009)
- Release Date
- 2009-06-30
- Peptides
- POLYSIALIC ACID O-ACETYLTRANSFERASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x ACT: ACETATE ION(Non-functional Binders)
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 3 x ACO: ACETYL COENZYME *A(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, H.J. et al., Structural and Kinetic Characterizations of the Polysialic Acid O-Acetyltransferase Oatwy from Neisseria Meningitidis. J.Biol.Chem. (2009)
- Release Date
- 2009-06-30
- Peptides
- POLYSIALIC ACID O-ACETYLTRANSFERASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C