SMTL ID : 2woj.2 (1 other biounit)

ADP-AlF4 complex of S. cerevisiae GET3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

homo-dimer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 22 residues within 4Å: Chain A: K.26, G.28, V.29, G.30, K.31, T.32, T.33, N.272, Q.273, P.315, L.316, C.317, G.319, E.320, I.321, F.330 Chain B: K.26, E.245, L.247, R.291 Ligands: ALF.2, MG.3 25 PLIP interactions: 18 interactions with chain A, 7 interactions with chain B Hydrogen bonds: A:K.26, A:G.28, A:V.29, A:G.30, A:K.31, A:T.32, A:T.32, A:T.33, A:T.33, A:N.272, A:Q.273, A:P.315, A:C.317, A:I.321 Water bridges: A:T.32, A:E.320, A:I.321, B:K.26, B:G.27, B:L.247, B:S.248, B:R.291 Salt bridges: A:K.31, B:K.26, B:K.26 ADP.5: 20 residues within 4Å: Chain A: K.26, E.245, L.247, R.291 Chain B: G.28, V.29, G.30, K.31, T.32, T.33, N.272, P.315, L.316, C.317, G.319, E.320, I.321, F.330 Ligands: ALF.6, MG.7 25 PLIP interactions: 19 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:K.26, B:G.28, B:V.29, B:G.30, B:K.31, B:T.32, B:T.33, B:T.33, B:N.272, B:Q.273, B:P.315, B:C.317, B:I.321, A:E.245 Water bridges: B:T.32, B:T.32, B:E.320, B:E.320, B:I.321, A:G.27, A:R.291, A:R.291 Salt bridges: B:K.31, A:K.26, A:K.26

2 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)

ALF.2: 10 residues within 4Å: Chain A: G.27, G.28, K.31, D.57, N.61, P.169 Chain B: K.26, G.27 Ligands: ADP.1, MG.3 No protein-ligand interaction detected (PLIP) ALF.6: 10 residues within 4Å: Chain A: K.26, G.27 Chain B: G.27, G.28, K.31, D.57, N.61, P.169 Ligands: ADP.5, MG.7 No protein-ligand interaction detected (PLIP)

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 5 residues within 4Å: Chain A: T.32, N.61, D.166 Ligands: ADP.1, ALF.2 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.32, H2O.1, H2O.3, H2O.6 MG.7: 4 residues within 4Å: Chain B: T.32, D.57 Ligands: ADP.5, ALF.6 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:T.32, H2O.7, H2O.9, H2O.12

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 4 residues within 4Å: Chain A: C.285, C.288 Chain B: C.285, C.288 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Metal complexes: A:C.285, A:C.288, B:C.285, B:C.288

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mateja, A. et al., The Structural Basis of Tail-Anchored Membrane Protein Recognition by Get3. Nature (2009)

Release Date

2009-08-11

Peptides

ATPASE GET3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ATPASE GET3

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