SMTL ID : 2ww4.1

a triclinic crystal form of E. coli 4-diphosphocytidyl-2C-methyl-D- erythritol kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 14 residues within 4Å: Chain A: V.60, D.64, N.65, L.66, K.96, P.99, M.100, G.101, G.105, G.106, G.107, S.108, N.110 Chain B: A.22 12 PLIP interactions: 11 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.65, A:N.65, A:L.66, A:K.96, A:P.99, A:G.101, A:G.106, A:G.107, A:S.108 Water bridges: A:L.104, A:S.108, B:A.22 ADP.2: 13 residues within 4Å: Chain A: A.22 Chain B: V.60, D.64, N.65, L.66, K.96, M.100, G.101, G.105, G.106, G.107, S.108, N.110 14 PLIP interactions: 13 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.65, B:N.65, B:L.66, B:K.96, B:G.101, B:G.105, B:G.107, B:S.108, B:S.108 Water bridges: B:G.101, B:G.103, B:G.106, B:D.141, A:A.22

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain B: D.50, I.51, H.62, R.72 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.72 Water bridges: B:R.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kalinowska-Tluscik, J. et al., A Triclinic Crystal Form of Escherichia Coli 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Kinase and Reassessment of the Quaternary Structure. Acta Crystallogr.,Sect.F (2010)

Release Date

2010-03-09

Peptides

4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE

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