SMTL ID : 2x0x.1 (1 other biounit)

Ribonucleotide reductase R1 subunit of E. coli to 2.3 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-6-6-mer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: T.209, P.621, S.622, E.623, T.624, S.625 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.209, A:E.623, A:T.624, A:S.625 Water bridges: A:S.625 SO4.2: 6 residues within 4Å: Chain C: T.209, P.621, S.622, E.623, T.624, S.625 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:T.209, C:E.623, C:T.624, C:S.625 Water bridges: C:S.625 SO4.3: 6 residues within 4Å: Chain E: T.209, P.621, S.622, E.623, T.624, S.625 7 PLIP interactions: 7 interactions with chain E Hydrogen bonds: E:T.209, E:T.209, E:E.623, E:T.624, E:T.624, E:S.625 Water bridges: E:S.625 SO4.4: 6 residues within 4Å: Chain G: T.209, P.621, S.622, E.623, T.624, S.625 7 PLIP interactions: 7 interactions with chain G Hydrogen bonds: G:T.209, G:T.209, G:E.623, G:T.624, G:T.624, G:S.625 Water bridges: G:S.625 SO4.5: 6 residues within 4Å: Chain I: T.209, P.621, S.622, E.623, T.624, S.625 5 PLIP interactions: 5 interactions with chain I Hydrogen bonds: I:T.209, I:E.623, I:T.624, I:S.625 Water bridges: I:S.625 SO4.6: 6 residues within 4Å: Chain K: T.209, P.621, S.622, E.623, T.624, S.625 7 PLIP interactions: 7 interactions with chain K Hydrogen bonds: K:T.209, K:T.209, K:E.623, K:T.624, K:T.624, K:S.625 Water bridges: K:S.625

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yokoyama, K. et al., Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase. J.Am.Chem.Soc. (2010)

Release Date

2010-01-26

Peptides

RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA: ACEGIK
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

C
C

E
C

G
C

I
C

K
C

B
F

D
F

F
F

H
F

J
F

L
F

RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA

RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA

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