SMTL ID : 3r1r.8 (8 other biounits)

RIBONUCLEOTIDE REDUCTASE R1 PROTEIN WITH AMPPNP OCCUPYING THE ACTIVITY SITE FROM ESCHERICHIA COLI

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-hexamer

Ligands

6 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 11 residues within 4Å: Chain A: K.9, E.15, R.16, I.17, N.18, K.21, I.22, V.25, T.55, H.59, K.91 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:E.15, A:E.15, A:N.18, A:K.21, A:K.21, A:T.55, A:H.59 Salt bridges: A:K.9, A:K.9, A:K.9, A:K.21, A:K.91, A:K.91 ATP.2: 11 residues within 4Å: Chain B: K.9, E.15, R.16, I.17, N.18, K.21, I.22, V.25, T.55, H.59, K.91 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:E.15, B:N.18, B:K.21, B:K.21, B:T.55, B:H.59 Salt bridges: B:K.9, B:K.9, B:K.9, B:K.21, B:K.91, B:K.91 ATP.3: 11 residues within 4Å: Chain C: K.9, E.15, R.16, I.17, N.18, K.21, I.22, V.25, T.55, H.59, K.91 13 PLIP interactions: 13 interactions with chain C Hydrogen bonds: C:E.15, C:E.15, C:N.18, C:K.21, C:K.21, C:T.55, C:H.59 Salt bridges: C:K.9, C:K.9, C:K.9, C:K.21, C:K.91, C:K.91 ATP.4: 11 residues within 4Å: Chain D: K.9, E.15, R.16, I.17, N.18, K.21, I.22, V.25, T.55, H.59, K.91 12 PLIP interactions: 12 interactions with chain D Hydrogen bonds: D:E.15, D:N.18, D:K.21, D:K.21, D:T.55, D:H.59 Salt bridges: D:K.9, D:K.9, D:K.9, D:K.21, D:K.91, D:K.91 ATP.5: 11 residues within 4Å: Chain E: K.9, E.15, R.16, I.17, N.18, K.21, I.22, V.25, T.55, H.59, K.91 13 PLIP interactions: 13 interactions with chain E Hydrogen bonds: E:E.15, E:E.15, E:N.18, E:K.21, E:K.21, E:T.55, E:H.59 Salt bridges: E:K.9, E:K.9, E:K.9, E:K.21, E:K.91, E:K.91 ATP.6: 11 residues within 4Å: Chain F: K.9, E.15, R.16, I.17, N.18, K.21, I.22, V.25, T.55, H.59, K.91 12 PLIP interactions: 12 interactions with chain F Hydrogen bonds: F:E.15, F:N.18, F:K.21, F:K.21, F:T.55, F:H.59 Salt bridges: F:K.9, F:K.9, F:K.9, F:K.21, F:K.91, F:K.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eriksson, M. et al., Binding of allosteric effectors to ribonucleotide reductase protein R1: reduction of active-site cysteines promotes substrate binding. Structure (1997)

Release Date

1998-01-28

Peptides

RIBONUCLEOTIDE REDUCTASE R1 PROTEIN: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

RIBONUCLEOTIDE REDUCTASE R1 PROTEIN

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