SMTL ID : 2x6j.1

THE CRYSTAL STRUCTURE OF THE DROSOPHILA CLASS III PI3-KINASE VPS34 IN COMPLEX WITH PIK-93

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

homo-dimer

Ligands

2 x 093: N-(5-(4-CHLORO-3-(2-HYDROXY-ETHYLSULFAMOYL)- PHENYLTHIAZOLE-2-YL)-ACETAMIDE(Non-covalent)

093.1: 15 residues within 4Å: Chain A: K.421, S.422, P.426, I.443, K.445, Y.479, L.491, Q.492, Y.493, V.494, S.496, N.557, L.559, I.569, D.570 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.443, A:Y.479, A:L.491, A:V.494, A:I.569 Hydrogen bonds: A:K.445, A:K.445, A:V.494, A:V.494, A:S.496, A:D.570 093.2: 14 residues within 4Å: Chain B: F.420, S.422, P.426, I.443, K.445, Y.479, L.491, Q.492, Y.493, V.494, S.496, L.559, I.569, D.570 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:F.420, B:Y.479, B:L.491, B:V.494, B:I.569 Hydrogen bonds: B:S.422, B:K.445, B:K.445, B:Y.493, B:V.494, B:V.494, B:S.496, B:D.570 Halogen bonds: B:K.445

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miller, S. et al., Shaping Development of Autophagy Inhibitors with the Structure of the Lipid Kinase Vps34. Science (2010)

Release Date

2010-04-07

Peptides

PHOSPHOTIDYLINOSITOL 3 KINASE 59F: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PHOSPHOTIDYLINOSITOL 3 KINASE 59F

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