SMTL ID : 2xaf.1

Crystal structure of LSD1-CoREST in complex with para-bromo-(+)-cis-2- phenylcyclopropyl-1-amine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.25 Å

Oligo State

hetero-1-1-mer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 36 residues within 4Å: Chain A: I.284, G.285, S.286, G.287, V.288, S.289, L.307, E.308, A.309, R.310, G.314, G.315, R.316, V.317, L.329, G.330, A.331, M.332, V.333, T.588, A.589, V.590, T.624, L.625, P.626, W.751, W.756, S.760, Y.761, G.800, E.801, A.809, T.810, V.811, A.814 Ligands: TCF.2 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:W.751, A:Y.761 Hydrogen bonds: A:S.286, A:G.287, A:S.289, A:S.289, A:G.290, A:A.309, A:R.310, A:R.310, A:G.314, A:R.316, A:A.331, A:M.332, A:V.333, A:V.333, A:V.590, A:V.590, A:E.801, A:V.811 Salt bridges: A:R.316, A:R.316

1 x TCF: 3-(4-BROMOPHENYL)PROPANAMIDE(Non-covalent)

TCF.2: 7 residues within 4Å: Chain A: M.332, T.335, K.661, Y.761, A.809, T.810 Ligands: FAD.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:T.335, A:Y.761, A:Y.761 Hydrogen bonds: A:K.661

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Binda, C. et al., Biochemical, Structural, and Biological Evaluation of Tranylcypromine Derivatives as Inhibitors of Histone Demethylases Lsd1 and Lsd2. J.Am.Chem.Soc. (2010)

Release Date

2010-05-05

Peptides

LYSINE-SPECIFIC HISTONE DEMETHYLASE 1: A
REST COREPRESSOR 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

LYSINE-SPECIFIC HISTONE DEMETHYLASE 1

REST COREPRESSOR 1

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