SMTL ID : 2xl3.1 (1 other biounit)

WDR5 IN COMPLEX WITH AN RBBP5 PEPTIDE AND HISTONE H3 PEPTIDE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ALA- ARG- THR- LYS- GLN: HISTONE H3.1(Non-covalent)

ALA-ARG-THR-LYS-GLN.1: 13 residues within 4Å: Chain A: A.47, V.48, S.49, A.65, S.91, D.107, F.133, K.259, Y.260, C.261, F.263, I.305, L.321 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.47, A:F.133, A:F.133, A:L.321 Hydrogen bonds: A:S.91, A:D.107, A:S.175, A:C.261 Water bridges: A:C.261

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: W.59, E.80, K.81, V.116, S.117 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.59, A:E.80, A:K.81 GOL.3: 4 residues within 4Å: Chain A: S.129, F.149, D.150, E.151 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.129, A:F.149, A:E.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Odho, Z. et al., Characterisation of a Novel Wdr5 Binding Site that Recruits Rbbp5 Through a Conserved Motif and Enhances Methylation of H3K4 by Mll1. J.Biol.Chem. (2010)

Release Date

2010-08-04

Peptides

WD REPEAT-CONTAINING PROTEIN 5: A
RETINOBLASTOMA-BINDING PROTEIN 5: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

WD REPEAT-CONTAINING PROTEIN 5

RETINOBLASTOMA-BINDING PROTEIN 5

Related Entries With Identical Sequence