SMTL ID : 2xpx.1

Crystal structure of BHRF1:Bak BH3 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

hetero-1-1-mer

Ligands

4 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 7 residues within 4Å: Chain A: S.30, R.31, G.34, N.35, G.36, T.37, L.38 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.31, A:N.35, A:N.35, A:G.36, A:T.37 Water bridges: A:H.39 NO3.2: 6 residues within 4Å: Chain A: I.70, R.73, N.74 Chain B: D.18, I.19, R.22 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:I.70, A:N.74, B:R.22 NO3.3: 4 residues within 4Å: Chain A: R.28, R.31, P.55, E.56 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.28, A:P.55, A:E.56 NO3.4: 7 residues within 4Å: Chain A: D.29, S.30, H.33, G.34, R.126, C.129, C.130 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.30 Water bridges: A:S.30, A:N.35

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 4 residues within 4Å: Chain A: H.39, T.134, Y.136, V.139 1 PLIP interactions: 1 interactions with chain A Water bridges: A:H.39 EDO.6: 2 residues within 4Å: Chain A: Y.136, Y.137 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.137 Water bridges: A:Y.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kvansakul, M. et al., Structural Basis for Apoptosis Inhibition by Epstein-Barr Virus Bhrf1. Plos Pathog. (2010)

Release Date

2011-01-26

Peptides

APOPTOSIS REGULATOR BHRF1: A
BCL-2 HOMOLOGOUS ANTAGONIST/KILLER: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

APOPTOSIS REGULATOR BHRF1

BCL-2 HOMOLOGOUS ANTAGONIST/KILLER

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