SMTL ID : 2wh6.1

Crystal structure of anti-apoptotic BHRF1 in complex with the Bim BH3 domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

9 x BR: BROMIDE ION(Non-covalent)

BR.1: 3 residues within 4Å: Chain A: H.91, V.92, Y.137 Ligand excluded by PLIP BR.2: 1 residues within 4Å: Chain A: S.54 Ligand excluded by PLIP BR.3: 2 residues within 4Å: Chain A: I.71, S.75 Ligand excluded by PLIP BR.4: 3 residues within 4Å: Chain A: W.82, T.127, L.128 Ligand excluded by PLIP BR.5: 2 residues within 4Å: Chain A: Y.136, Y.137 Ligand excluded by PLIP BR.6: 2 residues within 4Å: Chain A: R.62, E.168 Ligand excluded by PLIP BR.7: 4 residues within 4Å: Chain A: R.106 Chain B: I.6, Q.10, R.13 Ligand excluded by PLIP BR.8: 2 residues within 4Å: Chain A: R.73, N.74 Ligand excluded by PLIP BR.9: 2 residues within 4Å: Chain A: P.40, Y.136 Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.10: 5 residues within 4Å: Chain A: R.19, T.49, R.144, L.147, E.148 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.19, A:R.19, A:R.144 Water bridges: A:E.48 GOL.11: 3 residues within 4Å: Chain A: S.75, E.76, T.79 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.75, A:E.76, A:T.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kvansakul, M. et al., Structural basis for apoptosis inhibition by Epstein-Barr virus BHRF1. PLoS Pathog. (2010)

Release Date

2010-05-26

Peptides

EARLY ANTIGEN PROTEIN R: A
BCL-2-LIKE PROTEIN 11: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

EARLY ANTIGEN PROTEIN R

BCL-2-LIKE PROTEIN 11

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